RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1031674", tax_kingdom = "Loebvirae" and tax_phylum = "Hofneiviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hofneiviricota · 3 ✖

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA1031674 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1441591 1441591 PRJNA1031674_P_NODE_4802_length_381_cov_2.000000_g4592_i0 PRJNA1031674 4802 381 2 7.62 Inoviridae sp. 2219103 Viruses Viruses 394 5.24e-105   NTclustered gi|2053040871|tpg|BK024249.1| 2219103 g4592 i0 87.006 22.6351706036745 354 40 92 6 8 358 1 351 MAG TPA_asm: Inoviridae sp. isolate ct4CW1, partial genome blastn 8624 394 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
2717124 2717124 PRJNA1031674_P_NODE_18843_length_263_cov_2.010526_g18632_i0 PRJNA1031674 18843 263 2.010526 5.28768338 Scuticavirus SMA6 2011078 Viruses Viruses 364 2.719999999999999e-96   NTclustered gi|1694995567|ref|NC_043029.1| 1346893 g18632 i0 91.635 2.98859315589354 263 22 100 0 1 263 6601 6863 Stenotrophomonas phage phiSMA6 proviral complete genome blastn 786 364 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Scuticavirus Scuticavirus SMA6
27035097 27035097 PRJNA1031674_P_NODE_14322_length_279_cov_2.029126_g14111_i0 PRJNA1031674 14322 279 2.029126 5.66126154 Inoviridae sp. 2219103 Viruses Viruses 84.3 6.46e-18   NR XOE99008.1 2219103 g14111 i0 64 0.806451612903226 75 27 80.6 0 277 53 114 188 XOE99008.1 MAG: DNA invertase [Inoviridae sp.] diamond 225 84.3 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;