RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1031674", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1031674 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10369858 10369858 PRJNA1031674_P_NODE_16449_length_272_cov_1.547739_g16238_i0 PRJNA1031674 16449 272 1.547739 4.20985008 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 279 1.05e-70   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g16238 i0 85.714 95.9522058823529 273 30 98 8 4 270 52328 52059 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 26099 279 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
31235641 31235641 PRJNA1031674_P_NODE_14635_length_278_cov_1.941463_g14424_i0 PRJNA1031674 14635 278 1.941463 5.39726714 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 69.7 1.69e-11   NR MFN8610340.1 3107663 g14424 i0 40.2 3.99280575539568 92 55 99.3 0 277 2 41 132 MFN8610340.1 hypothetical protein [Vulcanimicrobiota bacterium] diamond 1110 69.7 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;