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contig_metadata

9 rows where bioproject = "PRJNA1031674", tax_clade = "Sar" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1031674 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1006862 1006862 PRJNA1031674_P_NODE_24261_length_247_cov_1.637931_g24050_i0 PRJNA1031674 24261 247 1.637931 4.04568957 root 1 Root_unresolved Root_unresolved 451 1.88e-122   NTclustered gi|166046524|emb|CU367641.1| 100861 g24050 i0 99.595 42.8987854251012 247 1 100 0 1 247 422 176 Aphanomyces euteiches cDNA blastn 10596 451 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
6544923 6544923 PRJNA1031674_P_NODE_4226_length_399_cov_2.628834_g4016_i0 PRJNA1031674 4226 399 2.628834 10.48904766 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 726 0   NTclustered gi|166044622|emb|CU367531.1| 100861 g4016 i0 99.499 52.7443609022556 399 2 100 0 1 399 31 429 Aphanomyces euteiches cDNA blastn 21045 726 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
6544928 6544928 PRJNA1031674_P_NODE_4466_length_391_cov_1.924528_g4256_i0 PRJNA1031674 4466 391 1.924528 7.52490448 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 723 0   NTclustered gi|166046682|emb|CU367792.1| 100861 g4256 i0 100 86.8158567774936 391 0 100 0 1 391 587 197 Aphanomyces euteiches cDNA blastn 33945 723 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
9094351 9094351 PRJNA1031674_P_NODE_27208_length_242_cov_1.130178_g26997_i0 PRJNA1031674 27208 242 1.130178 2.73503076 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 431 2.4e-116   NTclustered gi|166044535|emb|CU367444.1| 100861 g26997 i0 98.76 8.41735537190083 242 3 100 0 1 242 210 451 Aphanomyces euteiches cDNA blastn 2037 431 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
12920268 12920268 PRJNA1031674_P_NODE_10251_length_294_cov_2.090498_g10040_i0 PRJNA1031674 10251 294 2.090498 6.14606412 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 544 3.69e-150   NTclustered gi|166046502|emb|CU367619.1| 100861 g10040 i0 100 85.2108843537415 294 0 100 0 1 294 435 142 Aphanomyces euteiches cDNA blastn 25052 544 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
12920540 12920540 PRJNA1031674_P_NODE_28391_length_236_cov_2.717791_g28180_i0 PRJNA1031674 28391 236 2.717791 6.41398676 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 436 4.999999999999999e-118   NTclustered gi|166044578|emb|CU367487.1| 100861 g28180 i0 100 39.0974576271186 236 0 100 0 1 236 119 354 Aphanomyces euteiches cDNA blastn 9227 436 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
14195461 14195461 PRJNA1031674_P_NODE_5852_length_355_cov_3.489362_g5641_i0 PRJNA1031674 5852 355 3.489362 12.3872351 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 302 3.0200000000000002e-77   NTclustered gi|325195233|emb|FR826028.1| 890382 g5641 i0 87.823 0.763380281690141 271 16 76 3 66 336 1 254 Albugo laibachii Nc14, genomic contig CONTIG_3114_NC14_v4_456_30 blastn 271 302 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
18858564 18858564 PRJNA1031674_P_NODE_29335_length_200_cov_4.566929_g29124_i0 PRJNA1031674 29335 200 4.566929 9.133858 root 1 Root_unresolved Root_unresolved 370 4.22e-98   NTclustered gi|166044589|emb|CU367498.1| 100861 g29124 i0 100 98.845 200 0 100 0 1 200 256 57 Aphanomyces euteiches cDNA blastn 19769 370 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
24392947 24392947 PRJNA1031674_P_NODE_7360_length_325_cov_2.190476_g7149_i0 PRJNA1031674 7360 325 2.190476 7.119047 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 590 5.2299999999999986e-164   NTclustered gi|166044475|emb|CU367384.1| 100861 g7149 i0 99.385 28.5538461538462 325 2 100 0 1 325 111 435 Aphanomyces euteiches cDNA blastn 9280 590 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;