RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA1028258" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1028258 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1440556 1440556 PRJNA1028258_P_NODE_91862_length_269_cov_1.620000_g91299_i0 PRJNA1028258 91862 269 1.62 4.3578 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 283 8.03e-72   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g91299 i0 85.874 806.423791821561 269 34 99 4 1 267 5033253 5033519 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 216928 283 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
15468668 15468668 PRJNA1028258_P_NODE_94793_length_266_cov_1.431472_g94230_i0 PRJNA1028258 94793 266 1.431472 3.80771552 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 137 6.53e-28   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g94230 i0 81.707 1.1203007518797 164 30 65 0 30 193 7681783 7681620 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 298 137 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
15468766 15468766 PRJNA1028258_P_NODE_99513_length_261_cov_1.609375_g98950_i0 PRJNA1028258 99513 261 1.609375 4.20046875 Vulcanimicrobium alpinum 3016050 Bacteria Bacteria 52.8 0.024   NTclustered gi|2416250577|dbj|AP025523.1| 3016050 g98950 i0 100 0.10727969348659 28 0 11 0 216 243 3366498 3366525 Vulcanimicrobium alpinum WC8-2 DNA, complete genome blastn 28 52.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Vulcanimicrobium Vulcanimicrobium alpinum
19289576 19289576 PRJNA1028258_P_NODE_15376_length_648_cov_2.305699_g14847_i0 PRJNA1028258 15376 648 2.305699 14.94092952 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 741 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g14847 i0 87.5 839.172839506173 648 73 99 8 5 648 5032721 5032078 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 543784 741 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
26813539 26813539 PRJNA1028258_P_NODE_112881_length_250_cov_1.392265_g112318_i0 PRJNA1028258 112881 250 1.392265 3.4806625 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 87.8 5.1e-18   NR MFN8613385.1 3107663 g112318 i0 62 0.852 71 22 85.2 1 236 24 4 69 MFN8613385.1 DUF1800 domain-containing protein [Vulcanimicrobiota bacterium] diamond 213 87.8 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
28677363 28677363 PRJNA1028258_P_NODE_110167_length_252_cov_1.551913_g109604_i0 PRJNA1028258 110167 252 1.551913 3.91082076 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 117 1.59e-28   NR MFA7480674.1 3107663 g109604 i0 71.1 0.988095238095238 83 24 98.8 0 2 250 140 222 MFA7480674.1 tetratricopeptide repeat protein [Vulcanimicrobiota bacterium] diamond 249 117 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
28740440 28740440 PRJNA1028258_P_NODE_152027_length_231_cov_0.876543_g151464_i0 PRJNA1028258 152027 231 0.876543 2.02481433 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 90.5 5.34e-20   NR HZV58939.1 3069296 g151464 i0 55.4 1.92207792207792 74 33 96.1 0 224 3 154 227 HZV58939.1 aspartate kinase [Candidatus Eremiobacteraceae bacterium] diamond 444 90.5 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium
29466234 29466234 PRJNA1028258_P_NODE_139810_length_233_cov_1.609756_g139247_i0 PRJNA1028258 139810 233 1.609756 3.75073148 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 117 1.29e-28   NR MFA7483330.1 3107663 g139247 i0 66.7 0.965665236051502 75 25 96.6 0 225 1 603 677 MFA7483330.1 DEAD/DEAH box helicase [Vulcanimicrobiota bacterium] diamond 225 117 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
29877223 29877223 PRJNA1028258_P_NODE_147831_length_232_cov_0.871166_g147268_i0 PRJNA1028258 147831 232 0.871166 2.02110512 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 69.3 1.34e-11   NR HEY1728394.1 2952909 g147268 i0 53.9 0.982758620689655 76 32 98.3 1 230 3 564 636 HEY1728394.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Baltobacteraceae bacterium] diamond 228 69.3 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
30572008 30572008 PRJNA1028258_P_NODE_94913_length_266_cov_1.335025_g94350_i0 PRJNA1028258 94913 266 1.335025 3.5511665 Candidatus Xenobia bacterium 3036772 Bacteria Bacteria 120 8.16e-30   NR GMU55623.1 3036772 g94350 i0 71.8 0.958646616541353 85 24 95.9 0 257 3 324 408 GMU55623.1 MAG: hypothetical protein AMXMBFR33_47690 [Candidatus Xenobia bacterium] diamond 255 120 1 Bacteria   Bacillati Vulcanimicrobiota Candidatus Xenobia       Candidatus Xenobia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;