RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1028258", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1028258 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30066565 30066565 PRJNA1028258_P_NODE_140912_length_233_cov_0.865854_g140349_i0 PRJNA1028258 140912 233 0.865854 2.01743982 Stygiolobus caldivivus 2824673 Archaea Archaea 72.4 1.15e-12   NR WP_221288046.1 2824673 g140349 i0 51.6 0.824034334763948 64 28 82.4 2 1 192 119 179 WP_221288046.1 ATP synthase subunit A [Stygiolobus caldivivus] diamond 192 72.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Stygiolobus Stygiolobus caldivivus
32145243 32145243 PRJNA1028258_P_NODE_168558_length_227_cov_0.898734_g167995_i0 PRJNA1028258 168558 227 0.898734 2.04012618 Archaea 2157 Archaea Archaea 49.7 8.14e-5   NR PUA32447.1 1973259 g167995 i0 40 3.87224669603524 75 43 99.1 2 1 225 11 83 PUA32447.1 MAG: rRNA metabolism protein [Zestosphaera tikiterensis] diamond 879 49.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Zestosphaera Zestosphaera tikiterensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;