RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1028258", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1028258 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31741645 31741645 PRJNA1028258_P_NODE_134117_length_235_cov_0.855422_g133554_i0 PRJNA1028258 134117 235 0.855422 2.0102417 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 117 4.04e-29   NR MEM2159676.1 2507556 g133554 i0 69.3 0.957446808510638 75 23 95.7 0 1 225 55 129 MEM2159676.1 hypothetical protein [Candidatus Nitrosotenuis sp.] diamond 225 117 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.
32335277 32335277 PRJNA1028258_P_NODE_121899_length_243_cov_0.925287_g121336_i0 PRJNA1028258 121899 243 0.925287 2.24844741 root 1 Root_unresolved Root_unresolved 128 9.21e-36   NR HVD21319.1 1971748 g121336 i0 79.7 1.95061728395062 79 16 97.5 0 243 7 74 152 HVD21319.1 DUF2975 domain-containing protein [Nitrososphaera sp.] diamond 474 128 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;