RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1028258", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1028258 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5267728 5267728 PRJNA1028258_P_NODE_465_length_2329_cov_66.530531_g400_i0 PRJNA1028258 465 2329 66.530531 1549.49606699 Red mite associated cystovirus 2936548 Viruses Viruses 4301 0   NTclustered gi|2239998157|gb|ON160023.1| 2936548 g400 i0 100 1.6728209531988 2329 0 100 0 1 2329 16 2344 Red mite associated cystovirus isolate RMACTV1-S P8, P12, P9, and P5 genes, complete cds blastn 3896 4301 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
7817561 7817561 PRJNA1028258_P_NODE_47_length_4310_cov_17.946239_g40_i0 PRJNA1028258 47 4310 17.946239 773.4829009 Pseudomonas phage ER16 2917704 Viruses Viruses 99 5.69e-15   NTclustered gi|2209092821|gb|OM650249.1| 2917704 g40 i0 87.5 0.0204176334106729 88 8 2 3 4212 4299 156 72 Pseudomonas phage ER16 segment M, complete sequence blastn 88 99 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Pseudomonas phage ER16
14192093 14192093 PRJNA1028258_P_NODE_12_length_5792_cov_3.769876_g11_i0 PRJNA1028258 12 5792 3.769876 218.35121792 Red mite associated cystovirus 2936548 Viruses Viruses 10654 0   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g11 i0 100 1.9690953038674 5769 0 99 0 1 5769 708 6476 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 11405 10654 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
14192198 14192198 PRJNA1028258_P_NODE_13632_length_687_cov_6.700647_g13132_i0 PRJNA1028258 13632 687 6.700647 46.03344489 Red mite associated cystovirus 2936548 Viruses Viruses 1269 0   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g13132 i0 100 1.27947598253275 687 0 100 0 1 687 18 704 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 879 1269 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;