RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1028258", tax_kingdom = "Loebvirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 6 ✖

bioproject 1

  • PRJNA1028258 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6542436 6542436 PRJNA1028258_P_NODE_19086_length_584_cov_1.961165_g18531_i0 PRJNA1028258 19086 584 1.961165 11.4532036 Scuticavirus SMA6 2011078 Viruses Viruses 713 0   NTclustered gi|1694995567|ref|NC_043029.1| 1346893 g18531 i0 88.812 1.56335616438356 581 65 99 0 2 582 3352 3932 Stenotrophomonas phage phiSMA6 proviral complete genome blastn 913 713 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Scuticavirus Scuticavirus SMA6
10368288 10368288 PRJNA1028258_P_NODE_54569_length_344_cov_1.643636_g54006_i0 PRJNA1028258 54569 344 1.643636 5.65410784 Scuticavirus SMA6 2011078 Viruses Viruses 459 1.64e-124   NTclustered gi|1694995567|ref|NC_043029.1| 1346893 g54006 i0 94.04 33.343023255814 302 18 88 0 43 344 6520 6219 Stenotrophomonas phage phiSMA6 proviral complete genome blastn 11470 459 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Scuticavirus Scuticavirus SMA6
11643896 11643896 PRJNA1028258_P_NODE_67310_length_312_cov_1.753086_g66747_i0 PRJNA1028258 67310 312 1.753086 5.46962832 Inoviridae sp. 2219103 Viruses Viruses 532 8.549999999999998e-147   NTclustered gi|2056792906|tpg|BK057154.1| 2219103 g66747 i0 98.039 4.98076923076923 306 6 98 0 7 312 2077 2382 MAG TPA_asm: Inoviridae sp. isolate ct3qb1, partial genome blastn 1554 532 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
21841190 21841190 PRJNA1028258_P_NODE_18658_length_591_cov_1.873563_g18103_i0 PRJNA1028258 18658 591 1.873563 11.07275733 Scuticavirus SMA6 2011078 Viruses Viruses 691 0   NTclustered gi|1694995567|ref|NC_043029.1| 1346893 g18103 i0 96.42 30.3587140439932 419 15 71 0 173 591 7383 6965 Stenotrophomonas phage phiSMA6 proviral complete genome blastn 17942 691 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Scuticavirus Scuticavirus SMA6
21842272 21842272 PRJNA1028258_P_NODE_70278_length_306_cov_1.797468_g69715_i0 PRJNA1028258 70278 306 1.797468 5.50025208 Inoviridae sp. 2219103 Viruses Viruses 566 8.239999999999998e-157   NTclustered gi|2056792906|tpg|BK057154.1| 2219103 g69715 i0 100 4 306 0 100 0 1 306 3886 4191 MAG TPA_asm: Inoviridae sp. isolate ct3qb1, partial genome blastn 1224 566 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
23117388 23117388 PRJNA1028258_P_NODE_56639_length_338_cov_1.319703_g56076_i0 PRJNA1028258 56639 338 1.319703 4.46059614 Inoviridae sp. 2219103 Viruses Viruses 625 1.4999999999999999e-174   NTclustered gi|2056792906|tpg|BK057154.1| 2219103 g56076 i0 100 5.99704142011834 338 0 100 0 1 338 4926 4589 MAG TPA_asm: Inoviridae sp. isolate ct3qb1, partial genome blastn 2027 625 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;