RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1028258", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1028258 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28645816 28645816 PRJNA1028258_P_NODE_136027_length_234_cov_1.200000_g135464_i0 PRJNA1028258 136027 234 1.2 2.808 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 62 7.43e-10   NR HWW13788.1 2052315 g135464 i0 59 0.961538461538462 39 16 50 0 46 162 111 149 HWW13788.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 225 62 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29087890 29087890 PRJNA1028258_P_NODE_175388_length_225_cov_0.910256_g174825_i0 PRJNA1028258 175388 225 0.910256 2.048076 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 42 0.0466   NR HXA00089.1 2052315 g174825 i0 47.2 0.48 36 19 48 0 6 113 54 89 HXA00089.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 108 42 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;