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contig_metadata

16 rows where bioproject = "PRJNA1028258", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 16 ✖

tax_kingdom 1

  • Bacillati · 16 ✖

bioproject 1

  • PRJNA1028258 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2279832 2279832 PRJNA1028258_P_NODE_137202_length_234_cov_0.860606_g136639_i0 PRJNA1028258 137202 234 0.860606 2.01381804 Armatimonadota bacterium 2033014 Bacteria Bacteria 77.8 3.59e-15   NR MFM7320311.1 2033014 g136639 i0 56.4 1.78205128205128 78 29 93.6 1 227 9 39 116 MFM7320311.1 SDR family NAD(P)-dependent oxidoreductase [Armatimonadota bacterium] diamond 417 77.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
2714389 2714389 PRJNA1028258_P_NODE_159583_length_229_cov_0.887500_g159020_i0 PRJNA1028258 159583 229 0.8875 2.032375 Fimbriimonas sp. 1936159 Bacteria Bacteria 196 8.92e-46   NTclustered gi|2778022393|emb|OZ123194.1| 1936159 g159020 i0 82.328 3.34061135371179 232 35 100 5 1 229 1689085 1688857 MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 blastn 765 196 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
3990702 3990702 PRJNA1028258_P_NODE_172764_length_226_cov_0.904459_g172201_i0 PRJNA1028258 172764 226 0.904459 2.04407734 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 131 1.54e-33   NR HZT43780.1 2739509 g172201 i0 85.3 4.9646017699115 75 11 99.6 0 225 1 300 374 HZT43780.1 molecular chaperone DnaK [Chthonomonadaceae bacterium] diamond 1122 131 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
8657904 8657904 PRJNA1028258_P_NODE_150247_length_231_cov_0.876543_g149684_i0 PRJNA1028258 150247 231 0.876543 2.02481433 Capsulimonadales bacterium 2971800 Bacteria Bacteria 127 3.02e-34   NR MDX1934911.1 2971800 g149684 i0 85.7 1 77 11 100 0 1 231 9 85 MDX1934911.1 DUF1559 domain-containing protein [Capsulimonadales bacterium] diamond 231 127 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium
27216556 27216556 PRJNA1028258_P_NODE_85422_length_279_cov_1.352381_g84859_i0 PRJNA1028258 85422 279 1.352381 3.77314299 root 1 Root_unresolved Root_unresolved 124 1.0799999999999999e-32   NR MFN3421020.1 2033014 g84859 i0 62.9 3.82795698924731 89 33 95.7 0 277 11 19 107 MFN3421020.1 hypothetical protein [Armatimonadota bacterium] diamond 1068 124 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27256249 27256249 PRJNA1028258_P_NODE_144303_length_232_cov_1.472393_g143740_i0 PRJNA1028258 144303 232 1.472393 3.41595176 Chthonomonadales bacterium 2282151 Bacteria Bacteria 48.1 3.96e-4   NR HEV2471644.1 2282151 g143740 i0 68.8 0.413793103448276 32 10 41.4 0 232 137 194 225 HEV2471644.1 S53 family peptidase [Chthonomonadales bacterium] diamond 96 48.1 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
27856266 27856266 PRJNA1028258_P_NODE_136225_length_234_cov_0.860606_g135662_i0 PRJNA1028258 136225 234 0.860606 2.01381804 Armatimonadota bacterium 2033014 Bacteria Bacteria 46.2 0.00119   NR HEX2999774.1 2033014 g135662 i0 38.3 0.769230769230769 60 36 76.9 1 206 27 40 98 HEX2999774.1 superoxide dismutase family protein [Armatimonadota bacterium] diamond 180 46.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27856318 27856318 PRJNA1028258_P_NODE_69525_length_308_cov_1.087866_g68962_i0 PRJNA1028258 69525 308 1.087866 3.35062728 Armatimonadota bacterium 2033014 Bacteria Bacteria 95.5 1.41e-21   NR MCC2670364.1 2033014 g68962 i0 52.5 5.91233766233766 101 47 97.4 1 8 307 63 163 MCC2670364.1 novO [Armatimonadota bacterium] diamond 1821 95.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27951133 27951133 PRJNA1028258_P_NODE_166865_length_227_cov_0.898734_g166302_i0 PRJNA1028258 166865 227 0.898734 2.04012618 Capsulimonadales bacterium 2971800 Bacteria Bacteria 82.8 2.15e-16   NR MDX1931645.1 2971800 g166302 i0 50.7 0.911894273127753 69 33 91.2 1 209 3 177 244 MDX1931645.1 HEAT repeat domain-containing protein [Capsulimonadales bacterium] diamond 207 82.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium
28519511 28519511 PRJNA1028258_P_NODE_138087_length_234_cov_0.860606_g137524_i0 PRJNA1028258 138087 234 0.860606 2.01381804 Armatimonadota bacterium 2033014 Bacteria Bacteria 46.6 5.58e-4   NR NCO36237.1 2033014 g137524 i0 37.1 1.57692307692308 62 29 79.5 1 47 232 7 58 NCO36237.1 Hsp20/alpha crystallin family protein [Armatimonadota bacterium] diamond 369 46.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29782360 29782360 PRJNA1028258_P_NODE_41391_length_393_cov_1.444444_g40828_i0 PRJNA1028258 41391 393 1.444444 5.67666492 Chthonomonas sp. 2282153 Bacteria Bacteria 63.5 8.35e-9   NR MBL8041002.1 2282153 g40828 i0 67.4 0.32824427480916 43 13 32.8 1 9 137 256 297 MBL8041002.1 matrilysin family metalloendoprotease [Chthonomonas sp.] diamond 129 63.5 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas sp.
30035186 30035186 PRJNA1028258_P_NODE_87451_length_276_cov_0.980676_g86888_i0 PRJNA1028258 87451 276 0.980676 2.70666576 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 43.9 0.0219   NR MBX3095839.1 2682144 g86888 i0 28.4 0.956521739130435 88 48 79.3 1 234 16 212 299 MBX3095839.1 NADH-quinone oxidoreductase subunit M [Fimbriimonadaceae bacterium] diamond 264 43.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30319937 30319937 PRJNA1028258_P_NODE_124112_length_241_cov_1.238372_g123549_i0 PRJNA1028258 124112 241 1.238372 2.98447652 Armatimonadia bacterium 2663015 Bacteria Bacteria 101 6.579999999999999e-23   NR MEN6643490.1 2663015 g123549 i0 63.3 0.983402489626556 79 29 98.3 0 239 3 6 84 MEN6643490.1 phage terminase large subunit family protein [Armatimonadia bacterium] diamond 237 101 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
30319974 30319974 PRJNA1028258_P_NODE_177672_length_225_cov_0.910256_g177109_i0 PRJNA1028258 177672 225 0.910256 2.048076 Armatimonadota bacterium 2033014 Bacteria Bacteria 52.8 7.45e-6   NR MBC7287207.1 2033014 g177109 i0 42 1.88 69 39 92 1 6 212 202 269 MBC7287207.1 hypothetical protein [Armatimonadota bacterium] diamond 423 52.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30848650 30848650 PRJNA1028258_P_NODE_109474_length_253_cov_1.157609_g108911_i0 PRJNA1028258 109474 253 1.157609 2.92875077 Bacteria 2 Bacteria Bacteria 138 4.63e-37   NR MBS1715899.1 2033014 g108911 i0 71.4 1.99209486166008 84 24 99.6 0 1 252 177 260 MBS1715899.1 PQQ-dependent sugar dehydrogenase [Armatimonadota bacterium] diamond 504 138 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31330565 31330565 PRJNA1028258_P_NODE_179076_length_224_cov_2.103226_g178513_i0 PRJNA1028258 179076 224 2.103226 4.71122624 Armatimonadota bacterium 2033014 Bacteria Bacteria 47.4 6.6e-4   NR MBM3497929.1 2033014 g178513 i0 40.3 3.08035714285714 62 34 83 1 188 3 199 257 MBM3497929.1 hypothetical protein [Armatimonadota bacterium] diamond 690 47.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;