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contig_metadata

26 rows where bioproject = "PRJNA1028258", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 26 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 26 ✖

bioproject 1

  • PRJNA1028258 · 26 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7816154 7816154 PRJNA1028258_P_NODE_137347_length_234_cov_0.860606_g136784_i0 PRJNA1028258 137347 234 0.860606 2.01381804 Chlamydiales bacterium 2047757 Bacteria Bacteria 116 2.27e-30   NR MDR3624404.1 2047757 g136784 i0 71.4 5.93589743589744 77 22 98.7 0 1 231 20 96 MDR3624404.1 superoxide dismutase [Chlamydiales bacterium] diamond 1389 116 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
16741956 16741956 PRJNA1028258_P_NODE_51654_length_353_cov_2.000000_g51091_i0 PRJNA1028258 51654 353 2 7.06 Chlamydiales bacterium 2047757 Bacteria Bacteria 206 6.189999999999999e-66   NR MCP5470421.1 2047757 g51091 i0 83.8 0.994334277620397 117 19 99.4 0 352 2 4 120 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 351 206 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27035057 27035057 PRJNA1028258_P_NODE_42162_length_389_cov_2.662500_g41599_i0 PRJNA1028258 42162 389 2.6625 10.357125 Chlamydiales bacterium 2047757 Bacteria Bacteria 221 1.64e-71   NR MCP5470421.1 2047757 g41599 i0 82.9 1.98971722365039 129 22 99.5 0 2 388 4 132 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 774 221 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27824909 27824909 PRJNA1028258_P_NODE_132844_length_235_cov_0.855422_g132281_i0 PRJNA1028258 132844 235 0.855422 2.0102417 Parachlamydiales bacterium 2052178 Bacteria Bacteria 81.3 6.98e-16   NR MBX7066361.1 2052178 g132281 i0 54.8 0.931914893617021 73 33 93.2 0 9 227 103 175 MBX7066361.1 MFS transporter [Parachlamydiales bacterium] diamond 219 81.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
28266624 28266624 PRJNA1028258_P_NODE_6446_length_960_cov_3.043771_g6097_i0 PRJNA1028258 6446 960 3.043771 29.2202016 Simkania sp. 34094 Bacteria Bacteria 256 3.9e-81   NR MCB1084310.1 34094 g6097 i0 75.9 0.53125 170 41 53.1 0 710 201 1 170 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 510 256 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
28329858 28329858 PRJNA1028258_P_NODE_155866_length_230_cov_0.881988_g155303_i0 PRJNA1028258 155866 230 0.881988 2.0285724 Chlamydiia bacterium 2052156 Bacteria Bacteria 42.4 0.0434   NR MCB1107454.1 2052156 g155303 i0 48.4 0.808695652173913 62 30 79.6 2 215 33 28 88 MCB1107454.1 hypothetical protein [Chlamydiia bacterium] diamond 186 42.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
28645852 28645852 PRJNA1028258_P_NODE_180607_length_217_cov_2.567568_g180044_i0 PRJNA1028258 180607 217 2.567568 5.57162256 Chlamydia psittaci 83554 Bacteria Bacteria 90.9 2.91e-22   NR EPP28937.1 1112246 g180044 i0 96.9 0.884792626728111 64 2 88.5 0 21 212 1 64 EPP28937.1 hypothetical protein CP082626L3_1649 [Chlamydia psittaci 08-2626_L3] diamond 192 90.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
28929909 28929909 PRJNA1028258_P_NODE_30168_length_462_cov_2.346056_g29607_i0 PRJNA1028258 30168 462 2.346056 10.83877872 Chlamydiales bacterium 2047757 Bacteria Bacteria 143 2.12e-40   NR MCP5470420.1 2047757 g29607 i0 60.4 0.902597402597403 139 53 90.3 1 2 418 9 145 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 417 143 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29087900 29087900 PRJNA1028258_P_NODE_34988_length_428_cov_2.373259_g34425_i0 PRJNA1028258 34988 428 2.373259 10.15754852 Chlamydiales bacterium 2047757 Bacteria Bacteria 223 2.3799999999999996e-72   NR MCP5470421.1 2047757 g34425 i0 83.1 1.82242990654206 130 22 91.1 0 426 37 3 132 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 780 223 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29371984 29371984 PRJNA1028258_P_NODE_26789_length_491_cov_2.018957_g26229_i0 PRJNA1028258 26789 491 2.018957 9.91307887 Chlamydiales bacterium 2047757 Bacteria Bacteria 162 1.13e-47   NR MCP5470420.1 2047757 g26229 i0 60.1 0.873727087576375 143 57 87.4 0 491 63 5 147 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 429 162 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29592499 29592499 PRJNA1028258_P_NODE_124830_length_240_cov_1.660819_g124267_i0 PRJNA1028258 124830 240 1.660819 3.9859656 Chlamydiales bacterium 2047757 Bacteria Bacteria 125 6.5e-34   NR MFN0065451.1 2047757 g124267 i0 72.6 0.9125 73 20 91.3 0 220 2 3 75 MFN0065451.1 superoxide dismutase [Chlamydiales bacterium] diamond 219 125 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29687350 29687350 PRJNA1028258_P_NODE_49930_length_359_cov_1.406897_g49367_i0 PRJNA1028258 49930 359 1.406897 5.05076023 Chlamydiales bacterium 2047757 Bacteria Bacteria 87.8 3.54e-19   NR MCP5470420.1 2047757 g49367 i0 81.8 0.459610027855153 55 10 46 0 357 193 27 81 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 165 87.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29782377 29782377 PRJNA1028258_P_NODE_75851_length_296_cov_0.938326_g75288_i0 PRJNA1028258 75851 296 0.938326 2.77744496 Simkania sp. 34094 Bacteria Bacteria 166 3.93e-49   NR MCB1084310.1 34094 g75288 i0 85.7 0.993243243243243 98 14 99.3 0 1 294 9 106 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 294 166 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
30003617 30003617 PRJNA1028258_P_NODE_82071_length_284_cov_2.613953_g81508_i0 PRJNA1028258 82071 284 2.613953 7.42362652 Simkania sp. 34094 Bacteria Bacteria 103 7.85e-25   NR MCB1084310.1 34094 g81508 i0 65.8 0.77112676056338 73 25 77.1 0 284 66 98 170 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 219 103 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
30153287 30153287 PRJNA1028258_P_NODE_50772_length_356_cov_1.731707_g50209_i0 PRJNA1028258 50772 356 1.731707 6.16487692 root 1 Root_unresolved Root_unresolved 150 9.749999999999999e-43   NR MCB1084310.1 34094 g50209 i0 64.1 1.98033707865169 117 42 98.6 0 354 4 29 145 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 705 150 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
30161201 30161201 PRJNA1028258_P_NODE_162972_length_228_cov_0.893082_g162409_i0 PRJNA1028258 162972 228 0.893082 2.03622696 Parachlamydia sp. 2052048 Bacteria Bacteria 48.5 2.77e-4   NR MCE2982390.1 2052048 g162409 i0 38.2 1 76 35 88.2 2 219 19 74 146 MCE2982390.1 hypothetical protein [Parachlamydia sp.] diamond 228 48.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia sp.
30477545 30477545 PRJNA1028258_P_NODE_43713_length_383_cov_1.280255_g43150_i0 PRJNA1028258 43713 383 1.280255 4.90337665 Chlamydiales bacterium 2047757 Bacteria Bacteria 186 1.06e-57   NR MCP5470420.1 2047757 g43150 i0 78.6 0.986945169712794 126 25 98.7 1 381 4 7 130 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 378 186 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
30793249 30793249 PRJNA1028258_P_NODE_137114_length_234_cov_0.860606_g136551_i0 PRJNA1028258 137114 234 0.860606 2.01381804 Chlamydia psittaci 83554 Bacteria Bacteria 93.6 4.25e-23   NR EPP28276.1 1112246 g136551 i0 90.4 0.935897435897436 73 7 93.6 0 2 220 3 75 EPP28276.1 putative membrane protein [Chlamydia psittaci 08-2626_L3] diamond 219 93.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
31203642 31203642 PRJNA1028258_P_NODE_35215_length_427_cov_1.351955_g34652_i0 PRJNA1028258 35215 427 1.351955 5.77284785 Chlamydia psittaci 1 83554 Bacteria Bacteria 53.5 2.24e-6   NR EPP36379.1 1238236 g34652 i0 100 0.154566744730679 22 0 15.5 0 346 281 1 22 EPP36379.1 hypothetical protein CP10743SC13_1075, partial [Chlamydia psittaci 10_743_SC13] diamond 66 53.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
31322610 31322610 PRJNA1028258_P_NODE_165395_length_227_cov_1.797468_g164832_i0 PRJNA1028258 165395 227 1.797468 4.08025236 root 1 Root_unresolved Root_unresolved 122 1.32e-33   NR MCB1084350.1 34094 g164832 i0 71.6 1.95594713656388 74 21 97.8 0 2 223 1 74 MCB1084350.1 MC/SLC25 family protein [Simkania sp.] diamond 444 122 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
31552232 31552232 PRJNA1028258_P_NODE_127056_length_238_cov_2.100592_g126493_i0 PRJNA1028258 127056 238 2.100592 4.99940896 Chlamydiales bacterium 2047757 Bacteria Bacteria 132 1.4799999999999998e-37   NR MCP5470420.1 2047757 g126493 i0 86.5 0.932773109243697 74 10 93.3 0 1 222 8 81 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 222 132 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31646760 31646760 PRJNA1028258_P_NODE_67897_length_311_cov_1.595041_g67334_i0 PRJNA1028258 67897 311 1.595041 4.96057751 Waddliaceae bacterium 2026802 Bacteria Bacteria 72 3.22e-12   NR HEY4831209.1 2026802 g67334 i0 46 1.44694533762058 87 45 82 1 303 49 266 352 HEY4831209.1 F0F1 ATP synthase subunit alpha [Waddliaceae bacterium] diamond 450 72 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae   Waddliaceae bacterium
32050232 32050232 PRJNA1028258_P_NODE_57378_length_336_cov_1.329588_g56815_i0 PRJNA1028258 57378 336 1.329588 4.46741568 root 1 Root_unresolved Root_unresolved 137 5.53e-39   NR MCB1084326.1 34094 g56815 i0 77.4 3 84 19 75 0 84 335 7 90 MCB1084326.1 serine/threonine-protein kinase [Simkania sp.] diamond 1008 138 0.992753623188406 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
32089843 32089843 PRJNA1028258_P_NODE_89198_length_273_cov_1.181373_g88635_i0 PRJNA1028258 89198 273 1.181373 3.22514829 Chlamydia psittaci 84-8471/1 1112230 Bacteria Bacteria 66.2 4.58e-12   NR EPP35918.1 1112230 g88635 i0 69.6 0.505494505494505 46 14 50.5 0 187 50 1 46 EPP35918.1 hypothetical protein CP8484711_2945, partial [Chlamydia psittaci 84-8471/1] diamond 138 66.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
32501405 32501405 PRJNA1028258_P_NODE_80419_length_288_cov_0.853881_g79856_i0 PRJNA1028258 80419 288 0.853881 2.45917728 Chlamydia psittaci 83554 Bacteria Bacteria 68.6 2.4e-12   NR EPP29195.1 1112246 g79856 i0 95.1 0.427083333333333 41 2 42.7 0 2 124 6 46 EPP29195.1 putative membrane protein, partial [Chlamydia psittaci 08-2626_L3] diamond 123 68.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
32658525 32658525 PRJNA1028258_P_NODE_136860_length_234_cov_0.860606_g136297_i0 PRJNA1028258 136860 234 0.860606 2.01381804 Chlamydiota bacterium 2081524 Bacteria Bacteria 43.1 0.0232   NR MBM3208012.1 2081524 g136297 i0 36.3 1.02564102564103 80 41 97.4 4 3 230 130 203 MBM3208012.1 hypothetical protein [Chlamydiota bacterium] diamond 240 43.1 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;