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contig_metadata

13 rows where bioproject = "PRJNA1028258", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 13 ✖

tax_clade 1

  • Metamonada · 13 ✖

bioproject 1

  • PRJNA1028258 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2715625 2715625 PRJNA1028258_P_NODE_59143_length_331_cov_1.782443_g58580_i0 PRJNA1028258 59143 331 1.782443 5.89988633 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.031   NTclustered gi|2806457902|ref|XM_068492258.1| 1144522 g58580 i0 96.875 0.0966767371601208 32 0 10 1 184 215 1922 1892 Tritrichomonas foetus uncharacterized protein (TRFO_05045), partial mRNA blastn 32 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
3990067 3990067 PRJNA1028258_P_NODE_131664_length_235_cov_1.271084_g131101_i0 PRJNA1028258 131664 235 1.271084 2.9870474 Trichomonas gallinae 56777 Parabasalia other_Eukaryota 156 1.56e-33   NTclustered gi|2587729139|gb|OR478975.1| 56777 g131101 i0 79.039 31.1957446808511 229 46 97 2 6 233 541 768 Trichomonas gallinae elongation factor 1 alpha (EF1A) mRNA, complete cds blastn 7331 156 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas gallinae
7817342 7817342 PRJNA1028258_P_NODE_37607_length_413_cov_1.177326_g37044_i0 PRJNA1028258 37607 413 1.177326 4.86235638 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.011   NTclustered gi|2806450614|ref|XM_068500446.1| 1144522 g37044 i0 100 0.0702179176755448 29 0 7 0 209 237 4312 4340 Tritrichomonas foetus uncharacterized protein (TRFO_18903), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
10366890 10366890 PRJNA1028258_P_NODE_145169_length_232_cov_0.871166_g144606_i0 PRJNA1028258 145169 232 0.871166 2.02110512 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92.8 2.44e-21   NR XP_001316606.1 412133 g144606 i0 56.6 10.8491379310345 76 33 98.3 0 4 231 28 103 XP_001316606.1 regulation of endocytosis [Trichomonas vaginalis G3] diamond 2517 92.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27035046 27035046 PRJNA1028258_P_NODE_173602_length_226_cov_0.872611_g173039_i0 PRJNA1028258 173602 226 0.872611 1.97210086 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 105 1.61e-25   NR XP_001316445.1 412133 g173039 i0 54.7 0.995575221238938 75 34 99.6 0 225 1 124 198 XP_001316445.1 phosphoprotein phosphatase protein [Trichomonas vaginalis G3] diamond 225 105 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27540724 27540724 PRJNA1028258_P_NODE_41104_length_394_cov_2.390769_g40541_i0 PRJNA1028258 41104 394 2.390769 9.41962986 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 167 9.54e-50   NR XP_068360038.1 1144522 g40541 i0 61.8 0.99746192893401 131 50 99.7 0 1 393 7 137 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 393 167 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27848264 27848264 PRJNA1028258_P_NODE_173264_length_226_cov_0.904459_g172701_i0 PRJNA1028258 173264 226 0.904459 2.04407734 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 77 1.37e-14   NR XP_001300296.1 412133 g172701 i0 50.7 9.76991150442478 71 35 94.2 0 14 226 108 178 XP_001300296.1 protein serine/threonine kinase protein [Trichomonas vaginalis G3] diamond 2208 77.4 0.994832041343669 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28172066 28172066 PRJNA1028258_P_NODE_22486_length_537_cov_1.365385_g21929_i0 PRJNA1028258 22486 537 1.365385 7.33211745 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 174 1.24e-51   NR KAH0785682.1 135588 g21929 i0 55.4 0.826815642458101 148 66 82.7 0 532 89 11 158 KAH0785682.1 Ras-related protein RABD1 [Histomonas meleagridis] diamond 444 174 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
28322012 28322012 PRJNA1028258_P_NODE_154506_length_230_cov_0.881988_g153943_i0 PRJNA1028258 154506 230 0.881988 2.0285724 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.2 5.98e-13   NR XP_067773816.1 135588 g153943 i0 46.5 4.86521739130435 71 38 92.6 0 213 1 32 102 XP_067773816.1 putative alpha-actinin [Histomonas meleagridis] diamond 1119 73.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30730106 30730106 PRJNA1028258_P_NODE_137274_length_234_cov_0.860606_g136711_i0 PRJNA1028258 137274 234 0.860606 2.01381804 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 90.9 2.73e-19   NR XP_068359062.1 1144522 g136711 i0 60 0.961538461538462 75 30 96.2 0 2 226 347 421 XP_068359062.1 STE family protein kinase [Tritrichomonas foetus] diamond 225 90.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30880196 30880196 PRJNA1028258_P_NODE_51714_length_353_cov_1.630282_g51151_i0 PRJNA1028258 51714 353 1.630282 5.75489546 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.8 3.25e-23   NR XP_067768974.1 135588 g51151 i0 46.2 9.73937677053824 117 47 99.4 2 1 351 44 144 XP_067768974.1 ribosomal protein S19e [Histomonas meleagridis] diamond 3438 97.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31425422 31425422 PRJNA1028258_P_NODE_124696_length_240_cov_1.865497_g124133_i0 PRJNA1028258 124696 240 1.865497 4.4771928 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 72 1.72e-12   NR XP_001304301.1 412133 g124133 i0 44.2 2.8875 77 42 96.3 1 9 239 337 412 XP_001304301.1 ribonuclease family [Trichomonas vaginalis G3] diamond 693 72 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32026607 32026607 PRJNA1028258_P_NODE_8518_length_855_cov_3.043257_g8076_i0 PRJNA1028258 8518 855 3.043257 26.01984735 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 74.7 4.3e-12   NR XP_001304133.1 412133 g8076 i0 29.4 0.571929824561404 163 109 55.8 4 15 491 7 167 XP_001304133.1 GTPase protein [Trichomonas vaginalis G3] diamond 489 74.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;