RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1028258", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA1028258 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27477434 27477434 PRJNA1028258_P_NODE_155243_length_230_cov_0.881988_g154680_i0 PRJNA1028258 155243 230 0.881988 2.0285724 Fidelibacterota bacterium 2026760 Bacteria Bacteria 42 0.043   NR MEE9189272.1 2026760 g154680 i0 28.2 0.926086956521739 71 51 92.6 0 228 16 77 147 MEE9189272.1 class II aldolase/adducin family protein [Fidelibacterota bacterium] diamond 213 42 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30383013 30383013 PRJNA1028258_P_NODE_150673_length_231_cov_0.876543_g150110_i0 PRJNA1028258 150673 231 0.876543 2.02481433 Fidelibacterota bacterium 2026760 Bacteria Bacteria 53.1 1.41e-6   NR MBT7378009.1 2026760 g150110 i0 61.1 1.4025974025974 36 14 46.8 0 108 1 76 111 MBT7378009.1 hypothetical protein [Fidelibacterota bacterium] diamond 324 53.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31259466 31259466 PRJNA1028258_P_NODE_151775_length_231_cov_0.876543_g151212_i0 PRJNA1028258 151775 231 0.876543 2.02481433 Bacteria 2 Bacteria Bacteria 69.3 1.33e-11   NR MCF7797650.1 2026760 g151212 i0 41.1 2.76623376623377 73 43 94.8 0 226 8 288 360 MCF7797650.1 gamma-glutamyltransferase [Fidelibacterota bacterium] diamond 639 69.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31765443 31765443 PRJNA1028258_P_NODE_172097_length_226_cov_0.904459_g171534_i0 PRJNA1028258 172097 226 0.904459 2.04407734 FCB group 1783270 Bacteria Bacteria 73.6 4.23e-13   NR MAS39957.1 2026760 g171534 i0 55.1 5.92035398230088 78 17 98.2 3 1 222 498 561 MAS39957.1 hypothetical protein [Fidelibacterota bacterium] diamond 1338 73.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31773361 31773361 PRJNA1028258_P_NODE_86077_length_278_cov_1.325359_g85514_i0 PRJNA1028258 86077 278 1.325359 3.68449802 Fidelibacterota bacterium 2026760 Bacteria Bacteria 43.5 0.015   NR RTZ95416.1 2026760 g85514 i0 35.1 0.830935251798561 77 35 66.9 1 195 10 59 135 RTZ95416.1 MAG: hypothetical protein DSY36_01980 [Fidelibacterota bacterium] diamond 231 43.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32776857 32776857 PRJNA1028258_P_NODE_59780_length_330_cov_0.923372_g59217_i0 PRJNA1028258 59780 330 0.923372 3.0471276 Pseudomonadati 3379134 Bacteria Bacteria 163 4.74e-49   NR MCH2445442.1 2026760 g59217 i0 68.2 6.88181818181818 107 31 97.3 1 1 321 9 112 MCH2445442.1 asparagine synthase-related protein [Fidelibacterota bacterium] diamond 2271 163 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;