RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where bioproject = "PRJNA1028258", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 10 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 10 ✖

bioproject 1

  • PRJNA1028258 · 10 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28487930 28487930 PRJNA1028258_P_NODE_114607_length_248_cov_2.888268_g114044_i0 PRJNA1028258 114607 248 2.888268 7.16290464 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 57 2.05e-7   NR MBN8573208.1 2447898 g114044 i0 65.9 0.943548387096774 41 14 49.6 0 124 246 15 55 MBN8573208.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 234 57 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29340481 29340481 PRJNA1028258_P_NODE_73669_length_300_cov_1.142857_g73106_i0 PRJNA1028258 73669 300 1.142857 3.428571 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 165 2.24e-46   NR MFN5309747.1 2447898 g73106 i0 70 1 100 30 100 0 300 1 306 405 MFN5309747.1 DUF1800 family protein [Candidatus Kapaibacterium sp.] diamond 300 165 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29498203 29498203 PRJNA1028258_P_NODE_98410_length_262_cov_2.020725_g97847_i0 PRJNA1028258 98410 262 2.020725 5.2942995 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 91.3 5.06e-20   NR MBN8573295.1 2447898 g97847 i0 82.7 0.595419847328244 52 9 59.5 0 1 156 215 266 MBN8573295.1 TIGR00282 family metallophosphoesterase [Candidatus Kapaibacterium sp.] diamond 156 91.3 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29529867 29529867 PRJNA1028258_P_NODE_179250_length_223_cov_2.298701_g178687_i0 PRJNA1028258 179250 223 2.298701 5.12610323 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 102 2.29e-25   NR HRI31420.1 2447898 g178687 i0 77.6 1.80269058295964 67 15 90.1 0 201 1 1 67 HRI31420.1 proton-conducting transporter membrane subunit [Candidatus Kapaibacterium sp.] diamond 402 102 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30192961 30192961 PRJNA1028258_P_NODE_178092_length_225_cov_0.846154_g177529_i0 PRJNA1028258 178092 225 0.846154 1.9038465 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 102 9.05e-25   NR HRE57677.1 2447898 g177529 i0 67.6 0.986666666666667 74 24 98.7 0 3 224 53 126 HRE57677.1 bacillithiol biosynthesis deacetylase BshB1 [Candidatus Kapaibacterium sp.] diamond 222 102 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30351529 30351529 PRJNA1028258_P_NODE_101652_length_259_cov_1.815789_g101089_i0 PRJNA1028258 101652 259 1.815789 4.70289351 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 133 7.94e-37   NR HRE56387.1 2447898 g101089 i0 84.7 0.984555984555985 85 13 98.5 0 257 3 56 140 HRE56387.1 C4-type zinc ribbon domain-containing protein [Candidatus Kapaibacterium sp.] diamond 255 133 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30666929 30666929 PRJNA1028258_P_NODE_125293_length_240_cov_1.292398_g124730_i0 PRJNA1028258 125293 240 1.292398 3.1017552 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 75.5 1.03e-13   NR MBN8574968.1 2447898 g124730 i0 57.4 0.7625 61 26 76.3 0 56 238 7 67 MBN8574968.1 VCBS repeat-containing protein [Candidatus Kapaibacterium sp.] diamond 183 75.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31140505 31140505 PRJNA1028258_P_NODE_179055_length_224_cov_2.154839_g178492_i0 PRJNA1028258 179055 224 2.154839 4.82683936 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 119 3.8699999999999997e-31   NR HRK59200.1 2447898 g178492 i0 83.3 0.883928571428571 66 11 88.4 0 224 27 214 279 HRK59200.1 translation elongation factor Ts [Candidatus Kapaibacterium sp.] diamond 198 119 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31172200 31172200 PRJNA1028258_P_NODE_130475_length_236_cov_0.934132_g129912_i0 PRJNA1028258 130475 236 0.934132 2.20455152 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 102 2.5e-23   NR MBN8572681.1 2447898 g129912 i0 65.4 0.991525423728814 78 26 99.2 1 234 1 724 800 MBN8572681.1 VWA domain-containing protein [Candidatus Kapaibacterium sp.] diamond 234 102 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32469674 32469674 PRJNA1028258_P_NODE_106819_length_255_cov_1.419355_g106256_i0 PRJNA1028258 106819 255 1.419355 3.61935525 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 51.2 3.74e-5   NR MBN8574401.1 2447898 g106256 i0 70.3 0.435294117647059 37 11 43.5 0 144 254 1 37 MBN8574401.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 111 51.2 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;