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contig_metadata

4 rows where bioproject = "PRJNA1028258", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1028258 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16740021 16740021 PRJNA1028258_P_NODE_110574_length_252_cov_1.267760_g110011_i0 PRJNA1028258 110574 252 1.26776 3.1947552 Pseudomonadati 3379134 Bacteria Bacteria 57.4 3.07e-7   NR ETB63582.1 1394712 g110011 i0 62 1.1547619047619 50 17 57.1 2 13 156 1844 1893 ETB63582.1 MAG: hypothetical protein O210_OD1C00001G0035 [Parcubacteria bacterium RAAC4_OD1_1] diamond 291 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium RAAC4_OD1_1
29908898 29908898 PRJNA1028258_P_NODE_94131_length_267_cov_1.111111_g93568_i0 PRJNA1028258 94131 267 1.111111 2.96666637 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 50.8 6.39e-6   NR MEN9558342.1 2762014 g93568 i0 44.8 2.25842696629213 67 35 74.2 2 45 242 4 69 MEN9558342.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 603 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30501092 30501092 PRJNA1028258_P_NODE_115813_length_247_cov_2.814607_g115250_i0 PRJNA1028258 115813 247 2.814607 6.95207929 Bacteria 2 Bacteria Bacteria 85.9 7.78e-19   NR MDO8660088.1 2762014 g115250 i0 77.6 1.71255060728745 49 11 59.5 0 149 3 2 50 MDO8660088.1 nucleoside-diphosphate kinase [Candidatus Parcubacteria bacterium] diamond 423 86.7 0.990772779700115 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32533045 32533045 PRJNA1028258_P_NODE_69679_length_307_cov_2.386555_g69116_i0 PRJNA1028258 69679 307 2.386555 7.32672385 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 52.8 2.31e-5   NR NCS99101.1 2762014 g69116 i0 62.9 0.635179153094462 35 12 33.2 1 72 173 175 209 NCS99101.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 195 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;