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contig_metadata

8 rows where bioproject = "PRJNA1025141" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1025141 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1437620 1437620 PRJNA1025141_P_NODE_8042_length_277_cov_1.122549_g7981_i0 PRJNA1025141 8042 277 1.122549 3.10946073 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 346 1.04e-90   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g7981 i0 89.17 18.5956678700361 277 30 100 0 1 277 554 278 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 5151 346 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
11641381 11641381 PRJNA1025141_P_NODE_2990_length_473_cov_1.477500_g2929_i0 PRJNA1025141 2990 473 1.4775 6.988575 Opisthokonta 33154 Platyhelminthes Platyhelminthes 154 2.52e-43   NR CAH8437807.1 39320 g2929 i0 81.5 4.76321353065539 92 17 58.4 0 3 278 172 263 CAH8437807.1 unnamed protein product [Heterobilharzia americana] diamond 2253 154 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Heterobilharzia Heterobilharzia americana
12916574 12916574 PRJNA1025141_P_NODE_751_length_930_cov_2.996499_g707_i0 PRJNA1025141 751 930 2.996499 27.8674407 Metazoa 33208 Platyhelminthes Platyhelminthes 393 7.659999999999998e-135   NR CAX83046.1 6182 g707 i0 76.2 39.9354838709677 248 59 80 0 7 750 1 248 CAX83046.1 60S ribosomal protein L8, partial [Schistosoma japonicum] diamond 37140 395 0.994936708860759 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
18014728 18014728 PRJNA1025141_P_NODE_855_length_877_cov_1.451493_g808_i0 PRJNA1025141 855 877 1.451493 12.72959361 Trematoda 6178 Platyhelminthes Platyhelminthes 179 6.45e-51   NR CAH8559497.1 57078 g808 i0 43.1 3.72177879133409 276 141 91.3 7 73 873 14 282 CAH8559497.1 unnamed protein product [Dicrocoelium dendriticum] diamond 3264 180 0.994444444444444 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
27446109 27446109 PRJNA1025141_P_NODE_10263_length_249_cov_0.875000_g10202_i0 PRJNA1025141 10263 249 0.875 2.17875 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 66.6 1.53e-10   NR PAA93605.1 282301 g10202 i0 43.5 0.831325301204819 69 39 83.1 0 249 43 376 444 PAA93605.1 hypothetical protein BOX15_Mlig031413g1 [Macrostomum lignano] diamond 207 66.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28645783 28645783 PRJNA1025141_P_NODE_10167_length_249_cov_0.875000_g10106_i0 PRJNA1025141 10167 249 0.875 2.17875 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 63.2 1.45e-9   NR PAA84922.1 282301 g10106 i0 50 0.602409638554217 50 23 57.8 1 144 1 121 170 PAA84922.1 hypothetical protein BOX15_Mlig016820g2 [Macrostomum lignano] diamond 150 63.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28898107 28898107 PRJNA1025141_P_NODE_6588_length_311_cov_1.605042_g6527_i0 PRJNA1025141 6588 311 1.605042 4.99168062 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 138 3.38e-37   NR PAA58179.1 282301 g6527 i0 62.4 1.94855305466238 101 36 95.5 1 309 13 196 296 PAA58179.1 hypothetical protein BOX15_Mlig030029g2 [Macrostomum lignano] diamond 606 138 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
30880177 30880177 PRJNA1025141_P_NODE_9134_length_255_cov_1.087912_g9073_i0 PRJNA1025141 9134 255 1.087912 2.7741756 Metazoa 33208 Platyhelminthes Platyhelminthes 100 6.61e-23   NR TNN11026.1 6182 g9073 i0 65.8 15.6117647058824 73 25 85.9 0 245 27 107 179 TNN11026.1 Lysosomal protective protein isoform 1 [Schistosoma japonicum] diamond 3981 101 0.99009900990099 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;