RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1025141" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1025141 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27635436 27635436 PRJNA1025141_P_NODE_4724_length_373_cov_1.763333_g4663_i0 PRJNA1025141 4724 373 1.763333 6.57723209 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 106 8.52e-26   NR GKT28404.1 2918883 g4663 i0 49.6 1.6970509383378 113 54 90.9 2 340 2 5 114 GKT28404.1 Glycoside hydrolase, family 25 like protein [Aduncisulcus paluster] diamond 633 106 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
28329820 28329820 PRJNA1025141_P_NODE_66_length_2190_cov_3.265942_g59_i0 PRJNA1025141 66 2190 3.265942 71.5241298 Kipferlia bialata 797122 Fornicata other_Eukaryota 52 0.0151   NR GIQ80334.1 797122 g59 i0 30.2 0.642465753424658 281 144 33.4 13 1531 800 1029 1294 GIQ80334.1 hypothetical protein KIPB_001114, partial [Kipferlia bialata] diamond 1407 52 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
29553185 29553185 PRJNA1025141_P_NODE_4130_length_400_cov_1.055046_g4069_i0 PRJNA1025141 4130 400 1.055046 4.220184 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.9 0.00135   NR XP_001707593.2 5741 g4069 i0 33.3 3.405 102 56 72.8 6 371 81 38 132 XP_001707593.2 High cysteine membrane protein Group 2 [Giardia intestinalis] diamond 1362 48.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
32658498 32658498 PRJNA1025141_P_NODE_60_length_2290_cov_5.939107_g53_i0 PRJNA1025141 60 2290 5.939107 136.0055503 Kipferlia bialata 797122 Fornicata other_Eukaryota 52.4 0.0123   NR GIQ80334.1 797122 g53 i0 27.3 0.268558951965066 205 129 24.5 7 1626 1066 719 921 GIQ80334.1 hypothetical protein KIPB_001114, partial [Kipferlia bialata] diamond 615 52.4 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;