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contig_metadata

23 rows where bioproject = "PRJNA1025141", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 23 ✖

tax_phylum 1

  • Acidobacteriota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1025141 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1437484 1437484 PRJNA1025141_P_NODE_12142_length_244_cov_0.894737_g12081_i0 PRJNA1025141 12142 244 0.894737 2.18315828 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 112 5.46e-29   NR HSL22177.1 2910147 g12081 i0 74.1 0.995901639344262 81 20 98.4 1 3 242 49 129 HSL22177.1 ECF-type sigma factor [Vicinamibacterales bacterium] diamond 243 112 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
6540889 6540889 PRJNA1025141_P_NODE_11286_length_246_cov_0.890173_g11225_i0 PRJNA1025141 11286 246 0.890173 2.18982558 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 142 4.95e-41   NR HWB30767.1 2910147 g11225 i0 82.9 1.98780487804878 82 14 100 0 246 1 4 85 HWB30767.1 shikimate kinase [Vicinamibacterales bacterium] diamond 489 142 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
11207437 11207437 PRJNA1025141_P_NODE_12589_length_242_cov_0.911243_g12528_i0 PRJNA1025141 12589 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 222 1.57e-53   NTclustered gi|2874254049|emb|OY970373.1| 171953 g12528 i0 83.402 96.8099173553719 241 39 99 1 3 242 5166250 5166010 MAG: uncultured Acidobacteriota bacterium isolate MFD09368.bin.c.1 genome assembly, chromosome: 1 blastn 23428 222 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
12916478 12916478 PRJNA1025141_P_NODE_13131_length_241_cov_0.916667_g13070_i0 PRJNA1025141 13131 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 129 1.77e-32   NR MEO8502555.1 1978231 g13070 i0 83.8 15.9336099585062 80 13 99.6 0 241 2 761 840 MEO8502555.1 translation initiation factor IF-2 [Acidobacteriota bacterium] diamond 3840 129 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
21839779 21839779 PRJNA1025141_P_NODE_9658_length_251_cov_0.865169_g9597_i0 PRJNA1025141 9658 251 0.865169 2.17157419 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 85.1 1.05e-17   NR HEU4892387.1 2910147 g9597 i0 50.6 0.99203187250996006 83 41 99.2 0 3 251 74 156 HEU4892387.1 GNAT family N-acetyltransferase [Vicinamibacterales bacterium] diamond 249 85.1 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
26939924 26939924 PRJNA1025141_P_NODE_10502_length_248_cov_0.880000_g10441_i0 PRJNA1025141 10502 248 0.88 2.1824 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 159 2.3999999999999998e-43   NR HVG86114.1 2910147 g10441 i0 89 2.9758064516129 82 9 99.2 0 1 246 569 650 HVG86114.1 ABC transporter permease [Vicinamibacterales bacterium] diamond 738 159 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27034986 27034986 PRJNA1025141_P_NODE_2_length_4236_cov_3.624309_g1_i0 PRJNA1025141 2 4236 3.624309 153.52572924 Blastocatellia bacterium 2052146 Bacteria Bacteria 190 1.12e-44   NR HMV46425.1 2052146 g1 i0 49 0.524079320113314 257 113 17.3 7 2355 3086 285 536 HMV46425.1 DUF4394 domain-containing protein [Blastocatellia bacterium] diamond 2220 190 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28574549 28574549 PRJNA1025141_P_NODE_2747_length_494_cov_1.517815_g2686_i0 PRJNA1025141 2747 494 1.517815 7.4980061 Pseudomonadati 3379134 Bacteria Bacteria 226 8.07e-71   NR KAA0253286.1 1978231 g2686 i0 65 3.98380566801619 163 56 98.4 1 486 1 96 258 KAA0253286.1 MAG: zinc metalloprotease [Acidobacteriota bacterium] diamond 1968 226 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28732576 28732576 PRJNA1025141_P_NODE_5887_length_330_cov_1.684825_g5826_i0 PRJNA1025141 5887 330 1.684825 5.5599225 Pseudomonadati 3379134 Bacteria Bacteria 116 1.1e-27   NR MCB1054384.1 1978231 g5826 i0 52.7 7.12727272727273 112 50 99.1 1 329 3 252 363 MCB1054384.1 M4 family metallopeptidase [Acidobacteriota bacterium] diamond 2352 116 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28929845 28929845 PRJNA1025141_P_NODE_13188_length_241_cov_0.904762_g13127_i0 PRJNA1025141 13188 241 0.904762 2.18047642 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 104 7.92e-24   NR HKV09459.1 2651171 g13127 i0 64.1 3.83402489626556 78 28 97.1 0 241 8 2071 2148 HKV09459.1 DUF6603 domain-containing protein [Thermoanaerobaculia bacterium] diamond 924 104 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29466213 29466213 PRJNA1025141_P_NODE_7790_length_282_cov_1.325359_g7729_i0 PRJNA1025141 7790 282 1.325359 3.73751238 Acidobacteriota bacterium 1978231 Bacteria Bacteria 55.8 1.2e-6   NR MEP7336774.1 1978231 g7729 i0 33.3 1.42553191489362 72 48 76.6 0 8 223 94 165 MEP7336774.1 kelch repeat-containing protein [Acidobacteriota bacterium] diamond 402 55.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29592473 29592473 PRJNA1025141_P_NODE_10250_length_249_cov_0.875000_g10189_i0 PRJNA1025141 10250 249 0.875 2.17875 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 110 1.4700000000000002e-27   NR HEX8736076.1 2283092 g10189 i0 68.7 3 83 24 100 1 249 1 73 153 HEX8736076.1 SDR family NAD(P)-dependent oxidoreductase [Pyrinomonadaceae bacterium] diamond 747 110 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30216600 30216600 PRJNA1025141_P_NODE_3932_length_410_cov_1.020772_g3871_i0 PRJNA1025141 3932 410 1.020772 4.1851652 root 1 Root_unresolved Root_unresolved 47.4 0.00271   NR MBA2604189.1 1978231 g3871 i0 29.2 2.29024390243902 113 58 82.7 3 409 71 91 181 MBA2604189.1 methyltransferase domain-containing protein [Acidobacteriota bacterium] diamond 939 47.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30414454 30414454 PRJNA1025141_P_NODE_11713_length_245_cov_0.895349_g11652_i0 PRJNA1025141 11713 245 0.895349 2.19360505 Candidatus Polarisedimenticolia bacterium 3069555 Bacteria Bacteria 67.8 4.38e-11   NR HKN46905.1 3069555 g11652 i0 43.6 0.955102040816327 78 44 95.5 0 235 2 1 78 HKN46905.1 TagF domain-containing protein [Candidatus Polarisedimenticolia bacterium] diamond 234 67.8 1 Bacteria   Pseudomonadati Acidobacteriota Candidatus Polarisedimenticolia       Candidatus Polarisedimenticolia bacterium
30540517 30540517 PRJNA1025141_P_NODE_9673_length_251_cov_0.865169_g9612_i0 PRJNA1025141 9673 251 0.865169 2.17157419 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 45.1 0.00606   NR HYG63891.1 2651171 g9612 i0 31.9 0.824701195219124 69 47 82.5 0 42 248 319 387 HYG63891.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 207 45.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
30635146 30635146 PRJNA1025141_P_NODE_11853_length_244_cov_0.900585_g11792_i0 PRJNA1025141 11853 244 0.900585 2.1974274 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 85.1 3.76e-17   NR HLH17717.1 2212468 g11792 i0 81 1.0327868852459 42 8 51.6 0 244 119 395 436 HLH17717.1 hypothetical protein [Bryobacteraceae bacterium] diamond 252 85.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31038489 31038489 PRJNA1025141_P_NODE_8355_length_271_cov_0.994949_g8294_i0 PRJNA1025141 8355 271 0.994949 2.69631179 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 107 9.63e-25   NR PYP82944.1 2169413 g8294 i0 54.4 4.97047970479705 90 41 99.6 0 1 270 44 133 PYP82944.1 MAG: decarboxylase [Blastocatellia bacterium AA13] diamond 1347 107 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium AA13
31235528 31235528 PRJNA1025141_P_NODE_35_length_2501_cov_3.736409_g31_i0 PRJNA1025141 35 2501 3.736409 93.44758909 Terriglobales bacterium 2282142 Bacteria Bacteria 166 7e-38   NR HXM09481.1 2282142 g31 i0 28.2 0.803678528588565 670 369 73.5 26 148 1986 670 1284 HXM09481.1 IPT/TIG domain-containing protein [Terriglobales bacterium] diamond 2010 166 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
31267320 31267320 PRJNA1025141_P_NODE_11355_length_246_cov_0.890173_g11294_i0 PRJNA1025141 11355 246 0.890173 2.18982558 Acidobacteriota bacterium 1978231 Bacteria Bacteria 80.1 2.77e-15   NR PYR93546.1 1978231 g11294 i0 53.1 0.98780487804878 81 38 98.8 0 246 4 551 631 PYR93546.1 MAG: hypothetical protein DMF84_09090 [Acidobacteriota bacterium] diamond 243 80.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31481155 31481155 PRJNA1025141_P_NODE_9596_length_251_cov_0.865169_g9535_i0 PRJNA1025141 9596 251 0.865169 2.17157419 root 1 Root_unresolved Root_unresolved 114 1.34e-27   NR HWF10651.1 2212468 g9535 i0 56.6 7.8406374501992 83 36 99.2 0 3 251 306 388 HWF10651.1 aldehyde dehydrogenase family protein [Bryobacteraceae bacterium] diamond 1968 114 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31520467 31520467 PRJNA1025141_P_NODE_10736_length_248_cov_0.862857_g10675_i0 PRJNA1025141 10736 248 0.862857 2.13988536 Acidobacteriota bacterium 1978231 Bacteria Bacteria 46.6 0.00127   NR MDQ6758358.1 1978231 g10675 i0 37.5 0.774193548387097 64 40 77.4 0 210 19 31 94 MDQ6758358.1 ParA family protein [Acidobacteriota bacterium] diamond 192 46.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32153064 32153064 PRJNA1025141_P_NODE_10578_length_248_cov_0.880000_g10517_i0 PRJNA1025141 10578 248 0.88 2.1824 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 136 5.549999999999999e-37   NR HVR29307.1 2651171 g10517 i0 79.7 0.955645161290323 79 16 95.6 0 1 237 57 135 HVR29307.1 NTP transferase domain-containing protein [Thermoanaerobaculia bacterium] diamond 237 136 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32658505 32658505 PRJNA1025141_P_NODE_9440_length_251_cov_0.865169_g9379_i0 PRJNA1025141 9440 251 0.865169 2.17157419 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 160 1.2899999999999999e-43   NR HEX7333951.1 2283092 g9379 i0 95.2 0.99203187250996006 83 4 99.2 0 2 250 165 247 HEX7333951.1 SBBP repeat-containing protein [Pyrinomonadaceae bacterium] diamond 249 160 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;