RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1025141" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA1025141 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19288534 19288534 PRJNA1025141_P_NODE_5536_length_342_cov_0.933086_g5475_i0 PRJNA1025141 5536 342 0.933086 3.19115412 FCB group 1783270 Bacteria Bacteria 195 3.1199999999999997e-60   NR WP_119341796.1 884155 g5475 i0 85.1 51.9912280701754 114 17 100 0 342 1 115 228 WP_119341796.1 glucose 1-dehydrogenase [Meiothermus hypogaeus] diamond 17781 196 0.994897959183674 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus hypogaeus
28519490 28519490 PRJNA1025141_P_NODE_9347_length_251_cov_1.207865_g9286_i0 PRJNA1025141 9347 251 1.207865 3.03174115 Thermus tengchongensis 1214928 Bacteria Bacteria 44.3 0.00969   NR WP_413788318.1 1214928 g9286 i0 28.9 1.36254980079681 114 47 96.8 3 2 244 113 225 WP_413788318.1 thermonuclease family protein [Thermus tengchongensis] diamond 342 44.3 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus tengchongensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;