contig_metadata
7 rows where bioproject = "PRJNA1025141" and tax_kingdom = "Orthornavirae"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9090424 | 9090424 | PRJNA1025141_P_NODE_6388_length_317_cov_0.946721_g6327_i0 | PRJNA1025141 | 6388 | 317 | 0.946721 | 3.00110557 | Japanese yam mosaic virus | 79917 | Viruses | Viruses | 188 | 6.47e-53 | NR | AIT13016.1 | 79917 | g6327 | i0 | 81 | 1.98738170347003 | 105 | 20 | 99.4 | 0 | 2 | 316 | 2056 | 2160 | AIT13016.1 polyprotein [Japanese yam mosaic virus] | diamond | 630 | 188 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Patatavirales | Potyviridae | Potyvirus | Potyvirus nippodioscoreae | ||
| 11641447 | 11641447 | PRJNA1025141_P_NODE_7010_length_300_cov_1.647577_g6949_i0 | PRJNA1025141 | 7010 | 300 | 1.647577 | 4.942731 | Potyvirus nippodioscoreae | 3240571 | Viruses | Viruses | 241 | 5.55e-59 | NTclustered | gi|745788249|gb|KJ789138.1| | 79917 | g6949 | i0 | 93.252 | 2.55666666666667 | 163 | 11 | 54 | 0 | 138 | 300 | 3164 | 3002 | Japanese yam mosaic virus isolate WX1, complete genome | blastn | 767 | 241 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Patatavirales | Potyviridae | Potyvirus | Potyvirus nippodioscoreae | ||
| 12916534 | 12916534 | PRJNA1025141_P_NODE_4551_length_381_cov_1.025974_g4490_i0 | PRJNA1025141 | 4551 | 381 | 1.025974 | 3.90896094 | Cryphonectria naterciae splipalmivirus 1 | 2841740 | Viruses | Viruses | 142 | 2.1899999999999998e-40 | NR | BCX55511.1 | 2841740 | g4490 | i0 | 58.7 | 0.992125984251969 | 126 | 51 | 99.2 | 1 | 2 | 379 | 26 | 150 | BCX55511.1 hypothetical protein 1 [Cryphonectria naterciae splipalmivirus 1] | diamond | 378 | 142 | 1 | Viruses | Orthornavirae | Lenarviricota | Amabiliviricetes | Wolframvirales | Splipalmiviridae | Divipalmivirus | Divipalmivirus cryphonectriae | ||
| 28866636 | 28866636 | PRJNA1025141_P_NODE_12308_length_243_cov_0.905882_g12247_i0 | PRJNA1025141 | 12308 | 243 | 0.905882 | 2.20129326 | Yam chlorotic necrosis virus | 2175329 | Viruses | Viruses | 145 | 2.83e-38 | NR | YP_010086840.1 | 2175329 | g12247 | i0 | 87.3 | 0.975308641975309 | 79 | 10 | 97.5 | 0 | 242 | 6 | 1630 | 1708 | YP_010086840.1 polyprotein [Yam chlorotic necrosis virus] | diamond | 237 | 145 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Patatavirales | Potyviridae | Macluravirus | Macluravirus dioscoreaflavinecrosis | ||
| 29371928 | 29371928 | PRJNA1025141_P_NODE_7129_length_297_cov_1.491071_g7068_i0 | PRJNA1025141 | 7129 | 297 | 1.491071 | 4.42848087 | Japanese yam mosaic virus | 79917 | Viruses | Viruses | 187 | 1.6699999999999999e-52 | NR | AJD23395.1 | 79917 | g7068 | i0 | 91.8 | 1.97979797979798 | 98 | 8 | 99 | 0 | 2 | 295 | 1770 | 1867 | AJD23395.1 polyprotein [Japanese yam mosaic virus] | diamond | 588 | 187 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Patatavirales | Potyviridae | Potyvirus | Potyvirus nippodioscoreae | ||
| 30793217 | 30793217 | PRJNA1025141_P_NODE_3594_length_430_cov_1.299720_g3533_i0 | PRJNA1025141 | 3594 | 430 | 1.29972 | 5.588796 | Grapevine wood holobiome associated narna-like virus 18 | 3398654 | Viruses | Viruses | 81.3 | 2.57e-16 | NR | XOD45390.1 | 3398654 | g3533 | i0 | 39 | 0.948837209302326 | 136 | 76 | 90 | 5 | 389 | 3 | 6 | 141 | XOD45390.1 HP2 [Grapevine wood holobiome associated narna-like virus 18] | diamond | 408 | 81.3 | 1 | Viruses | Orthornavirae | Lenarviricota | Amabiliviricetes | Wolframvirales | Narnaviridae | Grapevine wood holobiome associated narna-like virus 18 | |||
| 32311550 | 32311550 | PRJNA1025141_P_NODE_11979_length_244_cov_0.900585_g11918_i0 | PRJNA1025141 | 11979 | 244 | 0.900585 | 2.1974274 | Pseudomonas phage ER16 | 2917704 | Viruses | Viruses | 68.2 | 3.73e-11 | NR | UNI73393.1 | 2917704 | g11918 | i0 | 43.2 | 1.99180327868852 | 81 | 42 | 94.7 | 2 | 3 | 233 | 206 | 286 | UNI73393.1 RNA dependent RNA polymerase [Pseudomonas phage ER16] | diamond | 486 | 68.2 | 1 | Viruses | Orthornavirae | Duplornaviricota | Vidaverviricetes | Mindivirales | Cystoviridae | Pseudomonas phage ER16 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;