RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1025141", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1025141 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7815382 7815382 PRJNA1025141_P_NODE_5027_length_361_cov_1.239583_g4966_i0 PRJNA1025141 5027 361 1.239583 4.47489463 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 153 9.489999999999997e-42   NR KAF4677256.1 330153 g4966 i0 68.8 0.797783933518006 96 29 79.8 1 360 73 368 462 KAF4677256.1 Cytosolic seryl-tRNA synthetase [Perkinsus chesapeaki] diamond 288 153 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
18014602 18014602 PRJNA1025141_P_NODE_1235_length_743_cov_2.386567_g1180_i0 PRJNA1025141 1235 743 2.386567 17.73219281 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 115 9.36e-21   NTclustered gi|294891730|ref|XM_002773664.1| 423536 g1180 i0 86.667 0.597577388963661 105 13 14 1 39 143 43 146 Perkinsus marinus ATCC 50983 40S ribosomal protein S25, putative, mRNA blastn 444 115 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;