RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1025141", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA1025141 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3989438 3989438 PRJNA1025141_P_NODE_8804_length_262_cov_0.783069_g8743_i0 PRJNA1025141 8804 262 0.783069 2.05164078 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 128 2.0899999999999997e-35   NR MBL8086383.1 2711154 g8743 i0 77.5 0.916030534351145 80 18 91.6 0 261 22 65 144 MBL8086383.1 ankyrin repeat domain-containing protein [Candidatus Obscuribacter sp.] diamond 240 128 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
30445931 30445931 PRJNA1025141_P_NODE_4833_length_369_cov_1.523649_g4772_i0 PRJNA1025141 4833 369 1.523649 5.62226481 Candidatus Melainabacteria bacterium RIFCSPLOWO2_12_FULL_35_11 1801609 Bacteria Bacteria 63.9 4.18e-9   NR OGI09100.1 1801609 g4772 i0 33 1.26829268292683 112 59 82.1 3 349 47 108 214 OGI09100.1 MAG: hypothetical protein A3F80_00030 [Candidatus Melainabacteria bacterium RIFCSPLOWO2_12_FULL_35_11] diamond 468 63.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium RIFCSPLOWO2_12_FULL_35_11

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;