contig_metadata
7 rows where bioproject = "PRJNA1025141" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6540869 | 6540869 | PRJNA1025141_P_NODE_10026_length_249_cov_2.068182_g9965_i0 | PRJNA1025141 | 10026 | 249 | 2.068182 | 5.14977318 | Candidatus Poribacteria bacterium | 2026781 | Bacteria | Bacteria | 78.7 | 3.72e-10 | NTclustered | gi|2893358452|emb|OZ220744.1| | 2026781 | g9965 | i0 | 91.228 | 0.373493975903614 | 57 | 5 | 23 | 0 | 80 | 136 | 6194134 | 6194078 | MAG: Candidatus Poribacteria bacterium isolate 67f587a8-c379-43ee-8694-439c00dbce40 genome assembly, chromosome: 1 | blastn | 93 | 78.7 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Poribacteria | Candidatus Poribacteria bacterium | ||||||
| 24388921 | 24388921 | PRJNA1025141_P_NODE_6900_length_303_cov_1.339130_g6839_i0 | PRJNA1025141 | 6900 | 303 | 1.33913 | 4.0575639 | Candidatus Aminicenantes bacterium | 2052149 | Bacteria | Bacteria | 243 | 1.56e-59 | NTclustered | gi|2874253756|emb|OY969696.1| | 2052149 | g6839 | i0 | 82.545 | 86.8877887788779 | 275 | 48 | 91 | 0 | 29 | 303 | 3775286 | 3775560 | MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.14 genome assembly, chromosome: 1 | blastn | 26327 | 243 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Aminicenantota | Candidatus Aminicenantes bacterium | ||||||
| 26781920 | 26781920 | PRJNA1025141_P_NODE_12281_length_243_cov_0.905882_g12220_i0 | PRJNA1025141 | 12281 | 243 | 0.905882 | 2.20129326 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 82.4 | 2.09e-16 | NR | MCP4523361.1 | 2044595 | g12220 | i0 | 47.9 | 0.876543209876543 | 71 | 37 | 87.7 | 0 | 235 | 23 | 190 | 260 | MCP4523361.1 ion transporter [Candidatus Altimarinota bacterium] | diamond | 213 | 82.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 27192909 | 27192909 | PRJNA1025141_P_NODE_1022_length_819_cov_2.128686_g972_i0 | PRJNA1025141 | 1022 | 819 | 2.128686 | 17.43393834 | Candidatus Babelota bacterium | 2030827 | Bacteria | Bacteria | 233 | 3.01e-73 | NR | MCA9770713.1 | 2030827 | g972 | i0 | 61 | 0.78021978021978 | 213 | 76 | 76.9 | 3 | 782 | 153 | 1 | 209 | MCA9770713.1 ribosomal protein L13e [Candidatus Dependentiae bacterium] | diamond | 639 | 233 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Babelota bacterium | |||||||
| 27351366 | 27351366 | PRJNA1025141_P_NODE_5923_length_329_cov_1.437500_g5862_i0 | PRJNA1025141 | 5923 | 329 | 1.4375 | 4.729375 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 52.8 | 3.11e-5 | NR | HHE76850.1 | 2762014 | g5862 | i0 | 38.2 | 4.06686930091185 | 76 | 46 | 68.4 | 1 | 22 | 246 | 356 | 431 | HHE76850.1 LamG domain-containing protein [Candidatus Parcubacteria bacterium] | diamond | 1338 | 52.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 27414516 | 27414516 | PRJNA1025141_P_NODE_11703_length_245_cov_0.895349_g11642_i0 | PRJNA1025141 | 11703 | 245 | 0.895349 | 2.19360505 | Candidatus Binataceae bacterium | 2785449 | Bacteria | Bacteria | 106 | 3.72e-27 | NR | HTT76625.1 | 2785449 | g11642 | i0 | 75.8 | 1.61632653061224 | 66 | 16 | 80.8 | 0 | 48 | 245 | 1 | 66 | HTT76625.1 hypothetical protein [Candidatus Binataceae bacterium] | diamond | 396 | 106 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Binatota | Candidatus Binatia | Candidatus Binatales | Candidatus Binataceae | Candidatus Binataceae bacterium | |||
| 29900896 | 29900896 | PRJNA1025141_P_NODE_11171_length_246_cov_0.890173_g11110_i0 | PRJNA1025141 | 11171 | 246 | 0.890173 | 2.18982558 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 73.9 | 1.21e-14 | NR | OGL44124.1 | 1817878 | g11110 | i0 | 44.3 | 5.78048780487805 | 79 | 44 | 96.3 | 0 | 237 | 1 | 34 | 112 | OGL44124.1 MAG: 30S ribosomal protein S11 [Candidatus Schekmanbacteria bacterium RBG_13_48_7] | diamond | 1422 | 73.9 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Schekmaniibacteriota | Candidatus Schekmanbacteria bacterium RBG_13_48_7 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;