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contig_metadata

11 rows where bioproject = "PRJNA1025141" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 11 ✖

bioproject 1

  • PRJNA1025141 · 11 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6540982 6540982 PRJNA1025141_P_NODE_506_length_1103_cov_5.203883_g474_i0 PRJNA1025141 506 1103 5.203883 57.39882949 Thecamonas trahens 529818 Root_unresolved Root_unresolved 403 2.6899999999999992e-107   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g474 i0 76.428 15.8585675430644 823 148 73 33 110 909 198 997 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 17492 403 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10365975 10365975 PRJNA1025141_P_NODE_1449_length_689_cov_1.423701_g1391_i0 PRJNA1025141 1449 689 1.423701 9.80929989 Thecamonas trahens 529818 Root_unresolved Root_unresolved 337 1.7e-87   NTclustered gi|923133140|ref|XM_013904582.1| 461836 g1391 i0 78.99 41.2119013062409 495 102 72 2 129 622 494 1 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_03185), partial mRNA blastn 28395 337 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12916455 12916455 PRJNA1025141_P_NODE_11511_length_245_cov_0.895349_g11450_i0 PRJNA1025141 11511 245 0.895349 2.19360505 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|923132710|ref|XM_013904367.1| 461836 g11450 i0 96.97 0.13469387755102 33 1 13 0 16 48 2245 2277 Thecamonas trahens ATCC 50062 disintegrin (AMSG_03465), mRNA blastn 33 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16739726 16739726 PRJNA1025141_P_NODE_3014_length_471_cov_3.035176_g2953_i0 PRJNA1025141 3014 471 3.035176 14.29567896 Thecamonas trahens 529818 Root_unresolved Root_unresolved 224 9.169999999999999e-54   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g2953 i0 82.879 41.2993630573248 257 36 54 6 30 282 529 277 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 19452 224 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
18855792 18855792 PRJNA1025141_P_NODE_4495_length_383_cov_1.270968_g4434_i0 PRJNA1025141 4495 383 1.270968 4.86780744 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 75.5 5.6e-13   NR XP_013757229.1 461836 g4434 i0 36.6 0.963446475195822 123 70 96.3 3 372 4 89 203 XP_013757229.1 NOD3 protein [Thecamonas trahens ATCC 50062] diamond 369 75.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27572111 27572111 PRJNA1025141_P_NODE_1224_length_748_cov_0.933333_g1169_i0 PRJNA1025141 1224 748 0.933333 6.98133084 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 108 6.129999999999999e-23   NR XP_013762411.1 461836 g1169 i0 29.3 1.03877005347594 259 159 94.7 6 30 737 547 804 XP_013762411.1 uncharacterized protein AMSG_00680 [Thecamonas trahens ATCC 50062] diamond 777 108 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30445923 30445923 PRJNA1025141_P_NODE_1993_length_583_cov_1.260784_g1933_i0 PRJNA1025141 1993 583 1.260784 7.35037072 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 92.4 3.75e-18   NR XP_013760602.1 461836 g1933 i0 48.4 0.957118353344768 95 47 48.4 2 528 247 91 184 XP_013760602.1 transcription factor lim1, variant [Thecamonas trahens ATCC 50062] diamond 558 92.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31038486 31038486 PRJNA1025141_P_NODE_5395_length_347_cov_0.967153_g5334_i0 PRJNA1025141 5395 347 0.967153 3.35602091 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.8 3.6700000000000006e-21   NR XP_013761778.1 461836 g5334 i0 39.5 2.00576368876081 119 66 97.7 1 8 346 98 216 XP_013761778.1 uncharacterized protein AMSG_01167 [Thecamonas trahens ATCC 50062] diamond 696 97.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31425402 31425402 PRJNA1025141_P_NODE_5716_length_336_cov_0.878327_g5655_i0 PRJNA1025141 5716 336 0.878327 2.95117872 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 74.3 9.71e-13   NR XP_013760817.1 461836 g5655 i0 40.9 1.95535714285714 110 64 97.3 1 336 10 498 607 XP_013760817.1 alpha-actinin A [Thecamonas trahens ATCC 50062] diamond 657 74.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31449297 31449297 PRJNA1025141_P_NODE_10196_length_249_cov_0.875000_g10135_i0 PRJNA1025141 10196 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 56.6 3.85e-7   NR XP_013760153.1 461836 g10135 i0 48.6 4.08433734939759 72 35 86.7 1 24 239 6 75 XP_013760153.1 50S ribosomal protein L15 [Thecamonas trahens ATCC 50062] diamond 1017 57 0.992982456140351 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32058071 32058071 PRJNA1025141_P_NODE_8318_length_272_cov_0.894472_g8257_i0 PRJNA1025141 8318 272 0.894472 2.43296384 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.1 6e-17   NR XP_013759160.1 461836 g8257 i0 45.6 0.992647058823529 90 49 99.3 0 270 1 212 301 XP_013759160.1 glutaredoxin [Thecamonas trahens ATCC 50062] diamond 270 85.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;