RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1022587" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1022587 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7815253 7815253 PRJNA1022587_S_NODE_187_length_472_cov_1.358396_g185_i0 PRJNA1022587 187 472 1.358396 6.41162912 Iflavirus sp. 1916690 Viruses Viruses 839 0   NTclustered gi|2895513791|tpg|BK068516.1| 1916690 g185 i0 98.729 3.97245762711864 472 6 100 0 1 472 7556 7085 TPA_asm: Iflavirus sp. isolate WUR45 polyprotein gene, complete cds blastn 1875 839 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
8657281 8657281 PRJNA1022587_S_NODE_867_length_287_cov_1.079439_g865_i0 PRJNA1022587 867 287 1.079439 3.09798993 Iflavirus 232799 Viruses Viruses 520 6.049999999999999e-143   NTclustered gi|2895513791|tpg|BK068516.1| 1916690 g865 i0 99.303 9.71080139372822 287 2 100 0 1 287 3537 3823 TPA_asm: Iflavirus sp. isolate WUR45 polyprotein gene, complete cds blastn 2787 525 0.990476190476191 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
20563857 20563857 PRJNA1022587_S_NODE_1077_length_266_cov_1.580311_g1075_i0 PRJNA1022587 1077 266 1.580311 4.20362726 Iflavirus sp. 1916690 Viruses Viruses 470 5.669999999999999e-128   NTclustered gi|2895513791|tpg|BK068516.1| 1916690 g1075 i0 98.496 2 266 4 100 0 1 266 7553 7818 TPA_asm: Iflavirus sp. isolate WUR45 polyprotein gene, complete cds blastn 532 470 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
20563863 20563863 PRJNA1022587_S_NODE_97_length_605_cov_3.020677_g95_i0 PRJNA1022587 97 605 3.020677 18.27509585 Iflavirus sp. 1916690 Viruses Viruses 1002 0   NTclustered gi|2895513791|tpg|BK068516.1| 1916690 g95 i0 96.683 9.29421487603306 603 19 99 1 1 602 9586 10188 TPA_asm: Iflavirus sp. isolate WUR45 polyprotein gene, complete cds blastn 5623 1002 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
21406159 21406159 PRJNA1022587_S_NODE_117_length_569_cov_2.852823_g115_i0 PRJNA1022587 117 569 2.852823 16.23256287 Iflavirus 232799 Viruses Viruses 1018 0   NTclustered gi|2895513791|tpg|BK068516.1| 1916690 g115 i0 98.946 13.2759226713533 569 6 100 0 1 569 9607 9039 TPA_asm: Iflavirus sp. isolate WUR45 polyprotein gene, complete cds blastn 7554 1018 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
22680868 22680868 PRJNA1022587_S_NODE_438_length_359_cov_1.562937_g436_i0 PRJNA1022587 438 359 1.562937 5.61094383 Iflavirus 232799 Viruses Viruses 592 1.6199999999999999e-164   NTclustered gi|2895513791|tpg|BK068516.1| 1916690 g436 i0 96.379 3.91364902506964 359 13 100 0 1 359 5682 5324 TPA_asm: Iflavirus sp. isolate WUR45 polyprotein gene, complete cds blastn 1405 592 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
23956423 23956423 PRJNA1022587_S_NODE_179_length_484_cov_1.771290_g177_i0 PRJNA1022587 179 484 1.77129 8.5730436 Iflavirus 232799 Viruses Viruses 861 0   NTclustered gi|2895513791|tpg|BK068516.1| 1916690 g177 i0 98.96 13.702479338843 481 5 99 0 1 481 8111 8591 TPA_asm: Iflavirus sp. isolate WUR45 polyprotein gene, complete cds blastn 6632 861 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;