RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1022587" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1022587 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
162662 162662 PRJNA1022587_S_NODE_301_length_408_cov_2.585075_g299_i0 PRJNA1022587 301 408 2.585075 10.547106 Allobaculum sp. Allo2 2853432 Bacteria Bacteria 466 1.18e-126   NTclustered gi|2212771376|gb|CP078088.1| 2853432 g299 i0 87.561 168.830882352941 410 42 100 5 1 408 743946 743544 Allobaculum sp. Allo2 chromosome, complete genome blastn 68883 466 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Allobaculum Allobaculum sp. Allo2
2279329 2279329 PRJNA1022587_S_NODE_982_length_275_cov_1.138614_g980_i0 PRJNA1022587 982 275 1.138614 3.1311885 Ligilactobacillus 2767887 Bacteria Bacteria 507 4.49e-139   NTclustered gi|1809148386|gb|CP040852.1| 1622 g980 i0 100 174.178181818182 274 0 99 0 2 275 1077414 1077141 Ligilactobacillus murinus strain V10 chromosome, complete genome blastn 47899 507 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Ligilactobacillus murinus
3554660 3554660 PRJNA1022587_S_NODE_1223_length_254_cov_1.480663_g1221_i0 PRJNA1022587 1223 254 1.480663 3.76088402 root 1 Root_unresolved Root_unresolved 470 5.37e-128   NTclustered gi|1720595190|gb|CP031776.1| 1404 g1221 i0 100 185.614173228346 254 0 100 0 1 254 6150510 6150763 Priestia megaterium strain Ni2-3 chromosome blastn 47146 470 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Priestia Priestia megaterium
3554662 3554662 PRJNA1022587_S_NODE_1383_length_247_cov_0.885057_g1381_i0 PRJNA1022587 1383 247 0.885057 2.18609079 root 1 Root_unresolved Root_unresolved 457 4.05e-124   NTclustered gi|1796975023|gb|CP033086.1| 1280 g1381 i0 100 43.668016194332 247 0 100 0 1 247 2426470 2426716 Staphylococcus aureus strain WH9628 chromosome blastn 10786 457 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus
3554667 3554667 PRJNA1022587_S_NODE_523_length_337_cov_1.537879_g521_i0 PRJNA1022587 523 337 1.537879 5.18265223 Ligilactobacillus 2767887 Bacteria Bacteria 623 5.369999999999999e-174   NTclustered gi|2533431055|gb|CP129339.1| 1605 g521 i0 100 641.878338278932 337 0 100 0 1 337 1368154 1368490 Ligilactobacillus animalis strain SRCM217969 chromosome, complete genome blastn 216313 623 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Ligilactobacillus animalis
7815254 7815254 PRJNA1022587_S_NODE_307_length_407_cov_1.568862_g305_i0 PRJNA1022587 307 407 1.568862 6.38526834 Erysipelotrichaceae bacterium ASTB_g 3027452 Bacteria Bacteria 477 5.439999999999998e-130   NTclustered gi|2556949764|gb|CP117813.1| 3027452 g305 i0 87.893 505.461916461916 413 40 99 10 2 407 81483 81074 Erysipelotrichaceae bacterium ASTB_g chromosome, complete genome blastn 205723 477 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae   Erysipelotrichaceae bacterium ASTB_g
8657277 8657277 PRJNA1022587_S_NODE_227_length_444_cov_1.571429_g225_i0 PRJNA1022587 227 444 1.571429 6.97714476 Ligilactobacillus 2767887 Bacteria Bacteria 811 0   NTclustered gi|2533431055|gb|CP129339.1| 1605 g225 i0 99.774 584.002252252252 442 1 99 0 3 444 470777 470336 Ligilactobacillus animalis strain SRCM217969 chromosome, complete genome blastn 259297 811 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Ligilactobacillus animalis
11641285 11641285 PRJNA1022587_S_NODE_30_length_930_cov_4.585764_g28_i0 PRJNA1022587 30 930 4.585764 42.6476052 Allobaculum sp. Allo2 2853432 Bacteria Bacteria 1382 0   NTclustered gi|2212771376|gb|CP078088.1| 2853432 g28 i0 93.576 591.315053763441 934 49 99 10 2 930 2440134 2441061 Allobaculum sp. Allo2 chromosome, complete genome blastn 549923 1382 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Allobaculum Allobaculum sp. Allo2
15465461 15465461 PRJNA1022587_S_NODE_1173_length_259_cov_0.962366_g1171_i0 PRJNA1022587 1173 259 0.962366 2.49252794 Allobaculum sp. Allo2 2853432 Bacteria Bacteria 158 4.859999999999999e-34   NTclustered gi|2212771376|gb|CP078088.1| 2853432 g1171 i0 89.764 15.069498069498099 127 8 48 4 5 129 743579 743456 Allobaculum sp. Allo2 chromosome, complete genome blastn 3903 158 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Allobaculum Allobaculum sp. Allo2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;