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contig_metadata

32 rows where bioproject = "PRJNA1022587" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Sar · 32 ✖

bioproject 1

  • PRJNA1022587 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
162663 162663 PRJNA1022587_S_NODE_321_length_400_cov_1.036697_g319_i0 PRJNA1022587 321 400 1.036697 4.146788 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 603 8.439999999999997e-168   NTclustered gi|56547674|gb|AY830090.1| 4787 g319 i0 94.015 1.51 401 18 100 3 1 400 734 1129 Phytophthora infestans clone PI-BAC-11A5 INF1 (inf1) and INF4 (inf4) genes, complete cds; Kre6-like (kre6-like) pseudogene, complete sequence; ORF457 gene, complete cds; INF3 (inf3) pseudogene, complete sequence; and INF6 (inf6) gene, complete cds blastn 604 603 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
1437441 1437441 PRJNA1022587_S_NODE_1302_length_250_cov_0.971751_g1300_i0 PRJNA1022587 1302 250 0.971751 2.4293775 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 278 3.43e-70   NTclustered gi|301104452|ref|XM_002901265.1| 403677 g1300 i0 95.906 21.836 171 7 68 0 1 171 137 307 Phytophthora infestans T30-4 uncharacterized protein (PITG_11820), partial mRNA blastn 5459 278 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
2713109 2713109 PRJNA1022587_S_NODE_1363_length_248_cov_0.811429_g1361_i0 PRJNA1022587 1363 248 0.811429 2.01234392 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 231 2.68e-56   NTclustered gi|2906044|gb|AF045427.1|AF045427 4787 g1361 i0 96.429 0.564516129032258 140 5 56 0 109 248 1 140 Phytophthora infestans clone O2ks repeat region blastn 140 231 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
3989256 3989256 PRJNA1022587_S_NODE_1404_length_246_cov_1.231214_g1402_i0 PRJNA1022587 1404 246 1.231214 3.02878644 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 344 3.27e-90   NTclustered gi|695405392|ref|XM_009525501.1| 67593 g1402 i0 99.471 13.3292682926829 189 1 77 0 58 246 201 13 Phytophthora sojae hypothetical protein partial mRNA blastn 3279 344 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
5265534 5265534 PRJNA1022587_S_NODE_105_length_588_cov_1.347573_g103_i0 PRJNA1022587 105 588 1.347573 7.92372924 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 625 2.729999999999999e-174   NTclustered gi|56547674|gb|AY830090.1| 4787 g103 i0 97.541 3.09863945578231 366 7 99 2 223 586 3171 2806 Phytophthora infestans clone PI-BAC-11A5 INF1 (inf1) and INF4 (inf4) genes, complete cds; Kre6-like (kre6-like) pseudogene, complete sequence; ORF457 gene, complete cds; INF3 (inf3) pseudogene, complete sequence; and INF6 (inf6) gene, complete cds blastn 1822 625 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
5265537 5265537 PRJNA1022587_S_NODE_325_length_398_cov_1.387692_g323_i0 PRJNA1022587 325 398 1.387692 5.52301416 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 296 1.59e-75   NTclustered gi|2906034|gb|AF045417.1|AF045417 4787 g323 i0 96.111 0.452261306532663 180 7 45 0 11 190 243 422 Phytophthora infestans clone AF2 repeat region blastn 180 296 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
7815257 7815257 PRJNA1022587_S_NODE_887_length_285_cov_0.816038_g885_i0 PRJNA1022587 887 285 0.816038 2.3257083 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 475 1.32e-129   NTclustered gi|301090384|ref|XM_002895362.1| 403677 g885 i0 96.842 6.68771929824561 285 7 100 2 1 285 1353 1071 Phytophthora infestans T30-4 uncharacterized protein (PITG_20406), partial mRNA blastn 1906 475 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
9090267 9090267 PRJNA1022587_S_NODE_1248_length_253_cov_1.033333_g1246_i0 PRJNA1022587 1248 253 1.033333 2.61433249 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 162 2.04e-44   NR KAI9989039.1 4787 g1246 i0 100 4.9802371541502 84 0 99.6 0 1 252 286 369 KAI9989039.1 hypothetical protein PInf_022762 [Phytophthora infestans] diamond 1260 162 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
9090270 9090270 PRJNA1022587_S_NODE_528_length_336_cov_1.376426_g526_i0 PRJNA1022587 528 336 1.376426 4.62479136 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 128 1.1e-31   NR KAI9998245.1 4787 g526 i0 90 0.625 70 7 62.5 0 211 2 357 426 KAI9998245.1 hypothetical protein PInf_002605 [Phytophthora infestans] diamond 210 128 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
10365911 10365911 PRJNA1022587_S_NODE_1589_length_241_cov_0.863095_g1587_i0 PRJNA1022587 1589 241 0.863095 2.08005895 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 335 1.9199999999999993e-87   NTclustered gi|56547674|gb|AY830090.1| 4787 g1587 i0 96.098 2.17842323651452 205 8 99 0 1 205 2074 1870 Phytophthora infestans clone PI-BAC-11A5 INF1 (inf1) and INF4 (inf4) genes, complete cds; Kre6-like (kre6-like) pseudogene, complete sequence; ORF457 gene, complete cds; INF3 (inf3) pseudogene, complete sequence; and INF6 (inf6) gene, complete cds blastn 525 335 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
14191296 14191296 PRJNA1022587_S_NODE_1132_length_263_cov_0.789474_g1130_i0 PRJNA1022587 1132 263 0.789474 2.07631662 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 198 2.9099999999999993e-46   NTclustered gi|301103683|ref|XM_002900882.1| 403677 g1130 i0 97.436 0.444866920152091 117 2 44 1 12 128 164 49 Phytophthora infestans T30-4 uncharacterized protein (PITG_12329), partial mRNA blastn 117 198 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
15031828 15031828 PRJNA1022587_S_NODE_1152_length_260_cov_2.486631_g1150_i0 PRJNA1022587 1152 260 2.486631 6.4652406 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 444 3.35e-120   NTclustered gi|33520246|gb|AY273991.1| 4787 g1150 i0 100 92.3692307692308 240 0 92 0 3 242 495 734 Phytophthora infestans large subunit ribosomal RNA gene, partial sequence blastn 24016 444 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
15465464 15465464 PRJNA1022587_S_NODE_213_length_454_cov_1.291339_g211_i0 PRJNA1022587 213 454 1.291339 5.86267906 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 710 0   NTclustered gi|56547674|gb|AY830090.1| 4787 g211 i0 94.934 2.60352422907489 454 22 100 1 1 454 1404 1856 Phytophthora infestans clone PI-BAC-11A5 INF1 (inf1) and INF4 (inf4) genes, complete cds; Kre6-like (kre6-like) pseudogene, complete sequence; ORF457 gene, complete cds; INF3 (inf3) pseudogene, complete sequence; and INF6 (inf6) gene, complete cds blastn 1182 710 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
15465468 15465468 PRJNA1022587_S_NODE_953_length_278_cov_1.004878_g951_i0 PRJNA1022587 953 278 1.004878 2.79356084 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 300 8.280000000000001e-77   NTclustered gi|695428791|ref|XM_009531739.1| 67593 g951 i0 100 0.58273381294964 162 0 58 0 1 162 511 672 Phytophthora sojae hypothetical protein partial mRNA blastn 162 300 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
16739625 16739625 PRJNA1022587_S_NODE_1454_length_245_cov_0.726744_g1452_i0 PRJNA1022587 1454 245 0.726744 1.7805228 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 442 1.1199999999999994e-119   NTclustered gi|695428791|ref|XM_009531739.1| 67593 g1452 i0 99.184 1.98775510204082 245 2 100 0 1 245 570 326 Phytophthora sojae hypothetical protein partial mRNA blastn 487 442 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
16739626 16739626 PRJNA1022587_S_NODE_1494_length_244_cov_0.847953_g1492_i0 PRJNA1022587 1494 244 0.847953 2.06900532 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 435 1.87e-117   NTclustered gi|56547695|gb|AY830101.1| 4787 g1492 i0 98.77 7.86885245901639 244 3 100 0 1 244 576 819 Phytophthora infestans gypsy-like retrotransposon GypsyPi-1b, complete sequence blastn 1920 435 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
16739627 16739627 PRJNA1022587_S_NODE_1554_length_242_cov_0.881657_g1552_i0 PRJNA1022587 1554 242 0.881657 2.13360994 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 381 2.449999999999999e-101   NTclustered gi|62147598|emb|AJ893357.1| 4787 g1552 i0 95.041 1 242 12 100 0 1 242 95799 96040 Phytophthora infestans, clone PI-BAC-49P21 blastn 242 381 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
18014551 18014551 PRJNA1022587_S_NODE_595_length_322_cov_1.108434_g593_i0 PRJNA1022587 595 322 1.108434 3.56915748 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 579 1.1199999999999997e-160   NTclustered gi|56547697|gb|AY830103.1| 4787 g593 i0 99.068 9.1055900621118 322 3 100 0 1 322 1617 1296 Phytophthora infestans gypsy-like retrotransposon GypsyPi-1d, complete sequence blastn 2932 579 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
21839569 21839569 PRJNA1022587_S_NODE_1218_length_255_cov_0.906593_g1216_i0 PRJNA1022587 1218 255 0.906593 2.31181215 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 436 5.469999999999999e-118   NTclustered gi|56547674|gb|AY830090.1| 4787 g1216 i0 97.638 9.90980392156863 254 6 99 0 1 254 101287 101034 Phytophthora infestans clone PI-BAC-11A5 INF1 (inf1) and INF4 (inf4) genes, complete cds; Kre6-like (kre6-like) pseudogene, complete sequence; ORF457 gene, complete cds; INF3 (inf3) pseudogene, complete sequence; and INF6 (inf6) gene, complete cds blastn 2527 436 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
21839574 21839574 PRJNA1022587_S_NODE_838_length_290_cov_0.944700_g836_i0 PRJNA1022587 838 290 0.9447 2.73963 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 69.4 2.67e-7   NTclustered gi|2794930048|ref|XM_067885575.1| 164328 g836 i0 89.655 0.6 58 0 18 1 239 290 1 58 Phytophthora ramorum Retrovirus-related Pol polyprotein from transposon TNT 1-94 (KRP23_14722), partial mRNA blastn 174 69.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
23956426 23956426 PRJNA1022587_S_NODE_899_length_284_cov_0.966825_g897_i0 PRJNA1022587 899 284 0.966825 2.745783 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 525 1.2899999999999994e-144   NTclustered gi|1552298312|gb|MH401206.1| 4787 g897 i0 100 100 284 0 100 0 1 284 647 364 Phytophthora infestans strain 13-A2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28400 525 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
24388776 24388776 PRJNA1022587_S_NODE_400_length_369_cov_0.777027_g398_i0 PRJNA1022587 400 369 0.777027 2.86722963 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 580 3.619999999999999e-161   NTclustered gi|62147598|emb|AJ893357.1| 4787 g398 i0 95.122 2.00271002710027 369 17 100 1 1 369 90316 90683 Phytophthora infestans, clone PI-BAC-49P21 blastn 739 580 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
25230356 25230356 PRJNA1022587_S_NODE_900_length_284_cov_0.947867_g898_i0 PRJNA1022587 900 284 0.947867 2.69194228 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 180 4.989999999999999e-55   NR KAF4132174.1 4787 g898 i0 93.6 0.992957746478873 94 6 99.3 0 2 283 99 192 KAF4132174.1 hypothetical protein GN958_ATG18628 [Phytophthora infestans] diamond 282 180 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
26749686 26749686 PRJNA1022587_S_NODE_481_length_344_cov_1.431734_g479_i0 PRJNA1022587 481 344 1.431734 4.92516496 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 207 4.91e-63   NR KAI9983278.1 4787 g479 i0 90.4 0.994186046511628 114 8 99.4 1 342 1 37 147 KAI9983278.1 hypothetical protein PInf_007233 [Phytophthora infestans] diamond 342 207 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
26908448 26908448 PRJNA1022587_S_NODE_162_length_501_cov_0.957944_g160_i0 PRJNA1022587 162 501 0.957944 4.79929944 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 352 2.7099999999999996e-109   NR KAF4143623.1 4787 g160 i0 98.8 0.994011976047904 166 2 99.4 0 499 2 1625 1790 KAF4143623.1 hypothetical protein GN958_ATG07187 [Phytophthora infestans] diamond 498 352 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
28993288 28993288 PRJNA1022587_S_NODE_368_length_379_cov_1.058824_g366_i0 PRJNA1022587 368 379 1.058824 4.01294296 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 161 3.85e-43   NR KAF4133169.1 4787 g366 i0 94.4 10.5514511873351 125 7 98.9 0 376 2 517 641 KAF4133169.1 hypothetical protein GN958_ATG17640 [Phytophthora infestans] diamond 3999 161 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
29434697 29434697 PRJNA1022587_S_NODE_610_length_320_cov_0.935223_g608_i0 PRJNA1022587 610 320 0.935223 2.9927136 Phytophthora palmivora 4796 SAR_Eukaryotes SAR_Eukaryotes 157 2.76e-45   NR POM74466.1 4796 g608 i0 96.1 0.721875 77 3 72.2 0 304 74 147 223 POM74466.1 Hypothetical protein PHPALM_8576 [Phytophthora palmivora] diamond 231 157 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
29592472 29592472 PRJNA1022587_S_NODE_1130_length_263_cov_1.126316_g1128_i0 PRJNA1022587 1130 263 1.126316 2.96221108 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 175 5.95e-53   NR KAG2874946.1 29920 g1128 i0 95.4 8.93155893536122 87 4 99.2 0 1 261 62 148 KAG2874946.1 hypothetical protein PC117_g27512 [Phytophthora cactorum] diamond 2349 175 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
29813780 29813780 PRJNA1022587_S_NODE_1011_length_272_cov_1.160804_g1009_i0 PRJNA1022587 1011 272 1.160804 3.15738688 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 52 2.62e-5   NR KAJ8525862.1 4785 g1009 i0 45.3 0.705882352941177 64 35 70.6 0 255 64 2 65 KAJ8525862.1 hypothetical protein ON010_g15260 [Phytophthora cinnamomi] diamond 192 52 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30571900 30571900 PRJNA1022587_S_NODE_1313_length_250_cov_0.779661_g1311_i0 PRJNA1022587 1313 250 0.779661 1.9491525 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 146 1.1999999999999996e-38   NR KAI9992435.1 4787 g1311 i0 88.9 1.944 81 9 97.2 0 3 245 593 673 KAI9992435.1 hypothetical protein PInf_017844 [Phytophthora infestans] diamond 486 146 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
32145224 32145224 PRJNA1022587_S_NODE_1258_length_252_cov_0.927374_g1256_i0 PRJNA1022587 1258 252 0.927374 2.33698248 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 170 9.449999999999999e-48   NR KAE8902854.1 53985 g1256 i0 98.8 5.92857142857143 83 1 98.8 0 251 3 292 374 KAE8902854.1 hypothetical protein PF003_g13543 [Phytophthora fragariae] diamond 1494 170 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
32784676 32784676 PRJNA1022587_S_NODE_920_length_282_cov_0.832536_g918_i0 PRJNA1022587 920 282 0.832536 2.34775152 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 167 6.409999999999998e-47   NR KAF4147955.1 4787 g918 i0 81.5 0.978723404255319 92 17 97.9 0 281 6 445 536 KAF4147955.1 hypothetical protein GN958_ATG02854 [Phytophthora infestans] diamond 276 167 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;