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contig_metadata

15 rows where bioproject = "PRJNA1022392" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1022392 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12916024 12916024 PRJNA1022392_P_NODE_55831_length_182_cov_5.096296_g55162_i0 PRJNA1022392 55831 182 5.096296 9.27525872 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 115 2.95e-28   NR MBS0646121.1 2026799 g55162 i0 98.3 1.97802197802198 60 1 98.9 0 1 180 119 178 MBS0646121.1 helicase [Verrucomicrobiota bacterium] diamond 360 115 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
18014278 18014278 PRJNA1022392_P_NODE_63855_length_172_cov_2.376000_g63186_i0 PRJNA1022392 63855 172 2.376 4.08672 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 107 1.21e-25   NR MDB6071009.1 2026801 g63186 i0 96.5 2.98255813953488 57 2 99.4 0 172 2 271 327 MDB6071009.1 signal recognition particle protein [Verrucomicrobiales bacterium] diamond 513 107 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
21838938 21838938 PRJNA1022392_P_NODE_35238_length_206_cov_2.308176_g34569_i0 PRJNA1022392 35238 206 2.308176 4.75484256 Luteolibacter sp. Populi 3230487 Bacteria Bacteria 63.9 8.32e-6   NTclustered gi|2774618348|gb|CP161812.1| 3230487 g34569 i0 97.368 29.621359223301 38 0 18 1 1 37 4881630 4881667 Luteolibacter sp. Populi chromosome, complete genome blastn 6102 63.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. Populi
26591507 26591507 PRJNA1022392_P_NODE_21701_length_227_cov_7.088889_g21032_i0 PRJNA1022392 21701 227 7.088889 16.09177803 Opitutales bacterium 2026772 Bacteria Bacteria 47.4 6.71e-4   NR HNX04777.1 2026772 g21032 i0 42.6 1.4273127753304 54 20 67.4 2 48 200 14 59 HNX04777.1 prepilin peptidase [Opitutales bacterium] diamond 324 47.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
27027049 27027049 PRJNA1022392_P_NODE_39082_length_200_cov_4.215686_g38413_i0 PRJNA1022392 39082 200 4.215686 8.431372 Pseudomonadati 3379134 Bacteria Bacteria 53.9 2.78e-7   NR MBS0623293.1 2026799 g38413 i0 87.1 1.485 31 4 46.5 0 95 3 16 46 MBS0623293.1 helix-turn-helix transcriptional regulator [Verrucomicrobiota bacterium] diamond 297 54.3 0.992633517495396 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28677313 28677313 PRJNA1022392_P_NODE_30427_length_206_cov_3.503145_g29758_i0 PRJNA1022392 30427 206 3.503145 7.2164787 Opitutia bacterium Tous-C4FEB 1982321 Bacteria Bacteria 45.1 0.00354   NR PAW86769.1 1982321 g29758 i0 57.6 1.25242718446602 33 13 46.6 1 2 97 230 262 PAW86769.1 MAG: hypothetical protein B9S26_15220 [Opitutia bacterium Tous-C4FEB] diamond 258 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium Tous-C4FEB
28740385 28740385 PRJNA1022392_P_NODE_35947_length_205_cov_7.189873_g35278_i0 PRJNA1022392 35947 205 7.189873 14.73923965 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 111 1.4700000000000002e-27   NR MDQ2919592.1 2026799 g35278 i0 86.8 1.99024390243902 68 7 99.5 1 204 1 102 167 MDQ2919592.1 ATP-binding protein [Verrucomicrobiota bacterium] diamond 408 111 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28835089 28835089 PRJNA1022392_P_NODE_83988_length_151_cov_4.942308_g83319_i0 PRJNA1022392 83988 151 4.942308 7.46288508 Rariglobus sp. 2706526 Bacteria Bacteria 79.7 2.22e-16   NR MDF3056521.1 2706526 g83319 i0 85.4 0.95364238410596 48 7 95.4 0 149 6 129 176 MDF3056521.1 lipolytic protein family [Rariglobus sp.] diamond 144 79.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
29340382 29340382 PRJNA1022392_P_NODE_54729_length_184_cov_1.715328_g54060_i0 PRJNA1022392 54729 184 1.715328 3.15620352 Chthoniobacter sp. 2510640 Bacteria Bacteria 74.3 1.12e-13   NR MDR3403487.1 2510640 g54060 i0 72.2 2.60869565217391 54 5 71.7 1 52 183 37 90 MDR3403487.1 IS256 family transposase [Chthoniobacter sp.] diamond 480 74.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter sp.
29750476 29750476 PRJNA1022392_P_NODE_75451_length_161_cov_0.894737_g74782_i0 PRJNA1022392 75451 161 0.894737 1.44052657 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 40.8 0.0471   NR MEN9813905.1 2026799 g74782 i0 53.1 0.596273291925466 32 15 59.6 0 119 24 89 120 MEN9813905.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 96 40.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29813775 29813775 PRJNA1022392_P_NODE_67051_length_168_cov_2.586777_g66382_i0 PRJNA1022392 67051 168 2.586777 4.34578536 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 67 3.59e-11   NR RYD83861.1 2026800 g66382 i0 58.5 0.946428571428571 53 22 94.6 0 8 166 83 135 RYD83861.1 MAG: hypothetical protein EOP84_07100 [Verrucomicrobiaceae bacterium] diamond 159 67 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31488928 31488928 PRJNA1022392_P_NODE_50496_length_189_cov_3.739437_g49827_i0 PRJNA1022392 50496 189 3.739437 7.06753593 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 57.8 8.93e-8   NR MES2468863.1 2026799 g49827 i0 46.8 0.984126984126984 62 33 98.4 0 3 188 500 561 MES2468863.1 protein kinase [Verrucomicrobiota bacterium] diamond 186 57.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31868121 31868121 PRJNA1022392_P_NODE_36957_length_205_cov_2.670886_g36288_i0 PRJNA1022392 36957 205 2.670886 5.4753163 Luteolibacter sp. 1962973 Bacteria Bacteria 60.8 9.24e-9   NR MFT3990581.1 1962973 g36288 i0 86.7 2.51707317073171 30 4 43.9 0 1 90 336 365 MFT3990581.1 sulfatase [Luteolibacter sp.] diamond 516 60.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
32216389 32216389 PRJNA1022392_P_NODE_21178_length_231_cov_2.146739_g20509_i0 PRJNA1022392 21178 231 2.146739 4.95896709 Prosthecobacter sp. 1965333 Bacteria Bacteria 91.3 2.01e-19   NR MCW0217363.1 1965333 g20509 i0 60.6 0.922077922077922 71 28 92.2 0 231 19 31 101 MCW0217363.1 hypothetical protein [Prosthecobacter sp.] diamond 213 91.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
32658469 32658469 PRJNA1022392_P_NODE_38820_length_201_cov_6.220779_g38151_i0 PRJNA1022392 38820 201 6.220779 12.50376579 Opitutaceae bacterium 2006848 Bacteria Bacteria 46.2 0.00121   NR HEY4988935.1 2006848 g38151 i0 38.5 1.56716417910448 52 25 76.1 2 48 200 14 59 HEY4988935.1 prepilin peptidase [Opitutaceae bacterium] diamond 315 46.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;