RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1022392" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1022392 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29623933 29623933 PRJNA1022392_P_NODE_67250_length_168_cov_1.925620_g66581_i0 PRJNA1022392 67250 168 1.92562 3.2350416 Rotaria socialis 392032 Rotifera other_Eukaryota 65.1 1.74e-10   NR CAF4800857.1 392032 g66581 i0 49.1 1.96428571428571 55 28 98.2 0 167 3 2466 2520 CAF4800857.1 unnamed protein product [Rotaria socialis] diamond 330 65.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
29750472 29750472 PRJNA1022392_P_NODE_62531_length_174_cov_1.551181_g61862_i0 PRJNA1022392 62531 174 1.551181 2.69905494 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 91.7 8.91e-20   NR CAF0886153.1 104777 g61862 i0 72.4 1 58 16 100 0 174 1 2916 2973 CAF0886153.1 unnamed protein product [Brachionus calyciflorus] diamond 174 91.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;