RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1022392", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1022392 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27824871 27824871 PRJNA1022392_P_NODE_64164_length_172_cov_1.408000_g63495_i0 PRJNA1022392 64164 172 1.408 2.42176 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 81.3 2.41e-16   NR MEM2159386.1 2507556 g63495 i0 68.4 0.994186046511628 57 18 99.4 0 2 172 18 74 MEM2159386.1 bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase [Candidatus Nitrosotenuis sp.] diamond 171 81.3 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.
30943529 30943529 PRJNA1022392_P_NODE_31714_length_206_cov_3.125786_g31045_i0 PRJNA1022392 31714 206 3.125786 6.43911916 Thermoproteati 1783275 Archaea Archaea 63.9 7.65e-10   NR WP_196815881.1 1353260 g31045 i0 73.2 30.3203883495146 41 11 59.7 0 1 123 327 367 WP_196815881.1 threonine--tRNA ligase [Candidatus Nitrosocosmicus oleophilus] diamond 6246 64.3 0.993779160186625 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;