RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1022392" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1022392 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5265024 5265024 PRJNA1022392_P_NODE_42385_length_195_cov_3.587838_g41716_i0 PRJNA1022392 42385 195 3.587838 6.9962841 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 114 1.2200000000000002e-27   NR HOP51088.1 2049428 g41716 i0 59.8 1.64615384615385 107 0 98.5 1 193 2 572 678 HOP51088.1 AAA family ATPase [Ignavibacteriales bacterium] diamond 321 114 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28456353 28456353 PRJNA1022392_P_NODE_70686_length_164_cov_2.940171_g70017_i0 PRJNA1022392 70686 164 2.940171 4.82188044 Ignavibacteria bacterium 2053306 Bacteria Bacteria 95.5 2.1200000000000003e-21   NR MCX8054836.1 2053306 g70017 i0 100 0.98780487804878 54 0 98.8 0 1 162 159 212 MCX8054836.1 NCS2 family permease [Ignavibacteria bacterium] diamond 162 95.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32753302 32753302 PRJNA1022392_P_NODE_84600_length_150_cov_4.300971_g83931_i0 PRJNA1022392 84600 150 4.300971 6.4514565 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 89.7 2.84e-19   NR HOP50199.1 2049428 g83931 i0 100 0.98 49 0 98 0 149 3 807 855 HOP50199.1 isoleucine--tRNA ligase [Ignavibacteriales bacterium] diamond 147 89.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;