RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1022392" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1022392 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27351352 27351352 PRJNA1022392_P_NODE_72903_length_163_cov_0.870690_g72234_i0 PRJNA1022392 72903 163 0.87069 1.4192247 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 79.3 4.61e-16   NR AAP34626.1 227086 g72234 i0 72.2 487.98773006135 54 15 99.4 0 162 1 183 236 AAP34626.1 ubiquitin/actin fusion protein 3, partial [Bigelowiella natans] diamond 79542 79.3 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
28266522 28266522 PRJNA1022392_P_NODE_20846_length_233_cov_2.688172_g20177_i0 PRJNA1022392 20846 233 2.688172 6.26344076 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.045   NR MES1908551.1 1215613 g20177 i0 46.9 0.630901287553648 49 24 63.1 2 19 165 528 574 MES1908551.1 hypothetical protein [Cercozoa sp. M6MM] diamond 147 42.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31773263 31773263 PRJNA1022392_P_NODE_56857_length_181_cov_2.701493_g56188_i0 PRJNA1022392 56857 181 2.701493 4.88970233 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 97.4 4.61e-22   NR YP_009118077.1 372086 g56188 i0 81.7 0.994475138121547 60 11 99.4 0 180 1 232 291 YP_009118077.1 ATP synthase F1 subunit alpha [Paracercomonas marina] diamond 180 97.4 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;