RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where bioproject = "PRJNA1022392" and tax_phylum = "Candidatus Cryosericota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cryosericota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1022392 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28456349 28456349 PRJNA1022392_P_NODE_64366_length_171_cov_6.354839_g63697_i0 PRJNA1022392 64366 171 6.354839 10.86677469 Candidatus Cryosericum hinesii 2290915 Bacteria Bacteria 42.7 0.0105   NR WP_119086985.1 2290915 g63697 i0 51.9 0.473684210526316 27 13 47.4 0 91 171 106 132 WP_119086985.1 biotin transporter BioY [Candidatus Cryosericum hinesii] diamond 81 42.7 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Candidatus Cryosericota Candidatus Cryosericia Candidatus Cryosericales Candidatus Cryosericaceae Candidatus Cryosericum Candidatus Cryosericum hinesii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;