contig_metadata
12 rows where bioproject = "PRJNA1022392", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2712837 | 2712837 | PRJNA1022392_P_NODE_61763_length_175_cov_1.570312_g61094_i0 | PRJNA1022392 | 61763 | 175 | 1.570312 | 2.748046 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 102 | 1.88e-23 | NR | HET6331680.1 | 3034171 | g61094 | i0 | 89.7 | 0.994285714285714 | 58 | 6 | 99.4 | 0 | 2 | 175 | 315 | 372 | HET6331680.1 potassium-transporting ATPase subunit KdpA [Polyangiales bacterium] | diamond | 174 | 102 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium | |||||
| 3989164 | 3989164 | PRJNA1022392_P_NODE_79484_length_158_cov_0.918919_g78815_i0 | PRJNA1022392 | 79484 | 158 | 0.918919 | 1.45189202 | Melittangium boletus | 83453 | Bacteria | Bacteria | 97.1 | 5.95e-16 | NTclustered | gi|1243026503|gb|CP022163.1| | 1294270 | g78815 | i0 | 78.571 | 30.6772151898734 | 154 | 27 | 96 | 6 | 1 | 151 | 5441378 | 5441228 | Melittangium boletus DSM 14713 chromosome, complete genome | blastn | 4847 | 97.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Melittangium | Melittangium boletus | ||
| 22680697 | 22680697 | PRJNA1022392_P_NODE_61558_length_175_cov_2.304688_g60889_i0 | PRJNA1022392 | 61558 | 175 | 2.304688 | 4.033204 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 111 | 4.83e-27 | NR | WP_331113401.1 | 1872627 | g60889 | i0 | 89.5 | 4.90285714285714 | 57 | 6 | 97.7 | 0 | 172 | 2 | 333 | 389 | WP_331113401.1 circularly permuted type 2 ATP-grasp protein, partial [Archangium sp.] | diamond | 858 | 111 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 28171988 | 28171988 | PRJNA1022392_P_NODE_44226_length_195_cov_2.547297_g43557_i0 | PRJNA1022392 | 44226 | 195 | 2.547297 | 4.96722915 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 95.5 | 1.05e-21 | NR | HEY4176108.1 | 2212474 | g43557 | i0 | 61.5 | 1.2 | 78 | 15 | 98.5 | 2 | 193 | 2 | 97 | 173 | HEY4176108.1 GNAT family N-acetyltransferase [Kofleriaceae bacterium] | diamond | 234 | 95.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 28614071 | 28614071 | PRJNA1022392_P_NODE_62687_length_174_cov_1.228346_g62018_i0 | PRJNA1022392 | 62687 | 174 | 1.228346 | 2.13732204 | Labilithrix sp. | 1971228 | Bacteria | Bacteria | 43.5 | 0.00771 | NR | HEY8080058.1 | 1971228 | g62018 | i0 | 52.8 | 1.06896551724138 | 36 | 17 | 62.1 | 0 | 127 | 20 | 270 | 305 | HEY8080058.1 hypothetical protein [Labilithrix sp.] | diamond | 186 | 43.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 28677322 | 28677322 | PRJNA1022392_P_NODE_58427_length_179_cov_2.318182_g57758_i0 | PRJNA1022392 | 58427 | 179 | 2.318182 | 4.14954578 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 81.3 | 2.77e-17 | NR | HCF57590.1 | 2026763 | g57758 | i0 | 67.8 | 0.988826815642458 | 59 | 19 | 98.9 | 0 | 177 | 1 | 102 | 160 | HCF57590.1 hypothetical protein [Myxococcales bacterium] | diamond | 177 | 81.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 29214216 | 29214216 | PRJNA1022392_P_NODE_66029_length_169_cov_4.024590_g65360_i0 | PRJNA1022392 | 66029 | 169 | 4.02459 | 6.8015571 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 75.9 | 3.62e-15 | NR | HTU59880.1 | 3034171 | g65360 | i0 | 67.9 | 0.994082840236686 | 56 | 18 | 99.4 | 0 | 1 | 168 | 47 | 102 | HTU59880.1 hypothetical protein [Polyangiales bacterium] | diamond | 168 | 75.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium | |||||
| 30224500 | 30224500 | PRJNA1022392_P_NODE_36752_length_205_cov_3.088608_g36083_i0 | PRJNA1022392 | 36752 | 205 | 3.088608 | 6.3316464 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 40 | 0.0427 | NR | MCX7808416.1 | 2026735 | g36083 | i0 | 43.5 | 0.673170731707317 | 46 | 23 | 64.4 | 2 | 9 | 140 | 18 | 62 | MCX7808416.1 CoA pyrophosphatase [Deltaproteobacteria bacterium] | diamond | 138 | 40 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30635132 | 30635132 | PRJNA1022392_P_NODE_46433_length_194_cov_2.421769_g45764_i0 | PRJNA1022392 | 46433 | 194 | 2.421769 | 4.69823186 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 42.4 | 0.0229 | NR | MFT5459207.1 | 2818507 | g45764 | i0 | 34.5 | 0.896907216494845 | 58 | 34 | 83.5 | 1 | 8 | 169 | 121 | 178 | MFT5459207.1 enoyl-CoA hydratase [Myxococcota bacterium] | diamond | 174 | 42.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31267309 | 31267309 | PRJNA1022392_P_NODE_73875_length_162_cov_1.086957_g73206_i0 | PRJNA1022392 | 73875 | 162 | 1.086957 | 1.76087034 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 90.1 | 2.47e-19 | NR | MCA9669137.1 | 2026763 | g73206 | i0 | 84.9 | 0.981481481481482 | 53 | 8 | 98.1 | 0 | 3 | 161 | 122 | 174 | MCA9669137.1 APC family permease [Myxococcales bacterium] | diamond | 159 | 90.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31646685 | 31646685 | PRJNA1022392_P_NODE_83217_length_153_cov_2.320755_g82548_i0 | PRJNA1022392 | 83217 | 153 | 2.320755 | 3.55075515 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 93.2 | 1.8e-20 | NR | MCA9507430.1 | 2026763 | g82548 | i0 | 76 | 0.980392156862745 | 50 | 12 | 98 | 0 | 3 | 152 | 227 | 276 | MCA9507430.1 DNA polymerase III subunit alpha [Myxococcales bacterium] | diamond | 150 | 93.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 32627208 | 32627208 | PRJNA1022392_P_NODE_84480_length_151_cov_2.009615_g83811_i0 | PRJNA1022392 | 84480 | 151 | 2.009615 | 3.03451865 | Archangium sp. | 1872627 | Bacteria | Bacteria | 88.6 | 4.99e-19 | NR | MDP2270670.1 | 1872627 | g83811 | i0 | 90 | 0.993377483443709 | 50 | 5 | 99.3 | 0 | 151 | 2 | 205 | 254 | MDP2270670.1 aminopeptidase [Archangium sp.] | diamond | 150 | 88.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;