RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1022392", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1022392 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5265026 5265026 PRJNA1022392_P_NODE_42445_length_195_cov_3.554054_g41776_i0 PRJNA1022392 42445 195 3.554054 6.9304053 Strongyloides papillosus 174720 Nematoda Nematoda 52.8 0.017   NTclustered gi|687022701|emb|LM525615.1| 174720 g41776 i0 100 1.00512820512821 28 0 14 0 9 36 148928 148901 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000025 blastn 196 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
30730064 30730064 PRJNA1022392_P_NODE_24154_length_214_cov_1.730539_g23485_i0 PRJNA1022392 24154 214 1.730539 3.70335346 Aphelenchoides avenae 70226 Nematoda Nematoda 42 0.0493   NR KAH7708978.1 70226 g23485 i0 44.6 0.785046728971963 56 28 75.7 2 192 31 373 427 KAH7708978.1 hypothetical protein AAVH_23746 [Aphelenchoides avenae] diamond 168 42 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;