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contig_metadata

28 rows where bioproject = "PRJNA1022392", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 28 ✖

tax_kingdom 1

  • Bacillati · 28 ✖

bioproject 1

  • PRJNA1022392 · 28 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2712796 2712796 PRJNA1022392_P_NODE_58183_length_179_cov_3.984848_g57514_i0 PRJNA1022392 58183 179 3.984848 7.13287792 Tepidiforma flava 3004094 Bacteria Bacteria 111 2.47e-20   NTclustered gi|2421951025|gb|CP115149.1| 3004094 g57514 i0 78.771 22.5474860335196 179 28 97 10 1 174 2662794 2662621 Tepidiforma flava strain YIM 72310 chromosome, complete genome blastn 4036 111 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae Tepidiforma Tepidiforma flava
5264901 5264901 PRJNA1022392_P_NODE_32545_length_206_cov_2.924528_g31876_i0 PRJNA1022392 32545 206 2.924528 6.02452768 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 126 1.82e-33   NR HEX3219411.1 3047546 g31876 i0 87.8 2.15533980582524 74 3 99 1 1 204 114 187 HEX3219411.1 IS256 family transposase [Candidatus Limnocylindria bacterium] diamond 444 126 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
7814655 7814655 PRJNA1022392_P_NODE_35267_length_206_cov_2.295597_g34598_i0 PRJNA1022392 35267 206 2.295597 4.72892982 uncultured Dehalococcoidia bacterium 498747 Bacteria Bacteria 75 3.84e-9   NTclustered gi|2531976033|emb|OY282371.1| 498747 g34598 i0 84.416 1.19417475728155 77 10 37 2 124 199 988765 988690 MAG: uncultured Dehalococcoidia bacterium genome assembly, chromosome: 1 blastn 246 75 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       uncultured Dehalococcoidia bacterium
12915920 12915920 PRJNA1022392_P_NODE_47071_length_193_cov_3.390411_g46402_i0 PRJNA1022392 47071 193 3.390411 6.54349323 Chloroflexia bacterium 2448782 Bacteria Bacteria 133 4.79e-36   NR MFN8513782.1 2448782 g46402 i0 93.8 0.994818652849741 64 4 99.5 0 193 2 73 136 MFN8513782.1 sugar phosphate isomerase/epimerase [Chloroflexia bacterium] diamond 192 133 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
14191231 14191231 PRJNA1022392_P_NODE_80692_length_157_cov_0.927273_g80023_i0 PRJNA1022392 80692 157 0.927273 1.45581861 Bacillati 1783272 Bacteria Bacteria 76.6 1.98e-15   NR HKG55917.1 2952938 g80023 i0 61.5 1.8343949044586 52 20 99.4 0 157 2 145 196 HKG55917.1 sugar transferase [Candidatus Limnocylindrales bacterium] diamond 288 76.6 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
23114280 23114280 PRJNA1022392_P_NODE_31279_length_206_cov_3.245283_g30610_i0 PRJNA1022392 31279 206 3.245283 6.68528298 Roseiflexaceae bacterium 2762507 Bacteria Bacteria 62 3.7e-9   NR HEY3231123.1 2762507 g30610 i0 40 2.92718446601942 100 28 99 1 3 206 503 602 HEY3231123.1 LuxR C-terminal-related transcriptional regulator [Roseiflexaceae bacterium] diamond 603 62 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae   Roseiflexaceae bacterium
24387951 24387951 PRJNA1022392_P_NODE_12420_length_314_cov_2.970037_g11756_i0 PRJNA1022392 12420 314 2.970037 9.32591618 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 207 5.9300000000000004e-49   NTclustered gi|470481958|ref|NR_076505.1| 357808 g11756 i0 84.951 122.920382165605 206 30 65 1 110 314 956 751 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 38597 207 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
26971596 26971596 PRJNA1022392_P_NODE_64742_length_171_cov_2.056452_g64073_i0 PRJNA1022392 64742 171 2.056452 3.51653292 Caldilineaceae bacterium 2614250 Bacteria Bacteria 80.1 6.06e-17   NR MEZ4731215.1 2614250 g64073 i0 69.1 0.964912280701754 55 17 96.5 0 5 169 1 55 MEZ4731215.1 GNAT family N-acetyltransferase [Caldilineaceae bacterium] diamond 165 80.1 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
27161119 27161119 PRJNA1022392_P_NODE_35242_length_206_cov_2.308176_g34573_i0 PRJNA1022392 35242 206 2.308176 4.75484256 Chloroflexota bacterium 2026724 Bacteria Bacteria 51.2 5.3e-6   NR MBI5877892.1 2026724 g34573 i0 54.5 0.640776699029126 44 20 64.1 0 2 133 44 87 MBI5877892.1 nucleoside 2-deoxyribosyltransferase [Chloroflexota bacterium] diamond 132 51.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27501291 27501291 PRJNA1022392_P_NODE_62683_length_174_cov_1.236220_g62014_i0 PRJNA1022392 62683 174 1.23622 2.1510228 Bacteria 2 Bacteria Bacteria 79.3 1.72e-15   NR MCL6648283.1 2026724 g62014 i0 54.4 3.93103448275862 57 26 98.3 0 173 3 182 238 MCL6648283.1 peptide ABC transporter substrate-binding protein [Chloroflexota bacterium] diamond 684 79.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27540622 27540622 PRJNA1022392_P_NODE_26784_length_206_cov_6.622642_g26115_i0 PRJNA1022392 26784 206 6.622642 13.64264252 Chloroflexia bacterium 2448782 Bacteria Bacteria 63.9 3.5e-10   NR MFN8511682.1 2448782 g26115 i0 96.9 0.466019417475728 32 1 46.6 0 111 206 22 53 MFN8511682.1 HAD-IA family hydrolase [Chloroflexia bacterium] diamond 96 63.9 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
27540630 27540630 PRJNA1022392_P_NODE_40404_length_196_cov_2.570470_g39735_i0 PRJNA1022392 40404 196 2.57047 5.0381212 Anaerolineae bacterium 2052143 Bacteria Bacteria 41.6 0.0476   NR HSH03880.1 2052143 g39735 i0 32.8 1.02551020408163 67 33 84.2 2 179 15 79 145 HSH03880.1 hypothetical protein [Anaerolineae bacterium] diamond 201 41.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28519456 28519456 PRJNA1022392_P_NODE_22607_length_222_cov_4.377143_g21938_i0 PRJNA1022392 22607 222 4.377143 9.71725746 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 43.9 0.0113   NR CAA9302627.1 166587 g21938 i0 44.2 0.581081081081081 43 21 58.1 1 204 76 304 343 CAA9302627.1 MAG: hypothetical protein AVDCRST_MAG77-5794 [uncultured Chloroflexota bacterium] diamond 129 43.9 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
28519475 28519475 PRJNA1022392_P_NODE_80987_length_157_cov_0.863636_g80318_i0 PRJNA1022392 80987 157 0.863636 1.35590852 Chloroflexota bacterium 2026724 Bacteria Bacteria 90.5 1.21e-19   NR MBX3031187.1 2026724 g80318 i0 90.2 1.94904458598726 51 5 97.5 0 3 155 106 156 MBX3031187.1 MFS transporter [Chloroflexota bacterium] diamond 306 90.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29434696 29434696 PRJNA1022392_P_NODE_81870_length_155_cov_2.898148_g81201_i0 PRJNA1022392 81870 155 2.898148 4.4921294 Chloroflexota bacterium 2026724 Bacteria Bacteria 107 2.5e-25   NR RLT41748.1 2026724 g81201 i0 100 1.9741935483871 51 0 98.7 0 154 2 116 166 RLT41748.1 MAG: isochorismate synthase [Chloroflexota bacterium] diamond 306 107 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29655593 29655593 PRJNA1022392_P_NODE_64670_length_171_cov_2.274194_g64001_i0 PRJNA1022392 64670 171 2.274194 3.88887174 Aggregatilineales bacterium 2952883 Bacteria Bacteria 75.9 2.88e-14   NR MFQ3672789.1 2952883 g64001 i0 62.5 0.982456140350877 56 21 98.2 0 2 169 147 202 MFQ3672789.1 serine/threonine-protein kinase [Aggregatilineales bacterium] diamond 168 75.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae Aggregatilineales     Aggregatilineales bacterium
30035087 30035087 PRJNA1022392_P_NODE_59071_length_178_cov_2.839695_g58402_i0 PRJNA1022392 59071 178 2.839695 5.0546571 Chloroflexota bacterium 2026724 Bacteria Bacteria 116 6.83e-30   NR HCG30413.1 2026724 g58402 i0 96.6 0.97752808988764 58 2 97.8 0 5 178 1 58 HCG30413.1 DUF932 domain-containing protein [Chloroflexota bacterium] diamond 174 116 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30508944 30508944 PRJNA1022392_P_NODE_84333_length_151_cov_2.480769_g83664_i0 PRJNA1022392 84333 151 2.480769 3.74596119 Chloroflexota bacterium 2026724 Bacteria Bacteria 77 2e-15   NR MBV9358183.1 2026724 g83664 i0 80.8 3.09933774834437 52 8 99.3 1 1 150 58 109 MBV9358183.1 WecB/TagA/CpsF family glycosyltransferase [Chloroflexota bacterium] diamond 468 77 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30817027 30817027 PRJNA1022392_P_NODE_81114_length_156_cov_4.559633_g80445_i0 PRJNA1022392 81114 156 4.559633 7.11302748 Bacteria 2 Bacteria Bacteria 87.8 1.51e-18   NR MDQ2689259.1 2026724 g80445 i0 82.7 3 52 9 100 0 1 156 358 409 MDQ2689259.1 ATP-dependent helicase [Chloroflexota bacterium] diamond 468 87.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30919853 30919853 PRJNA1022392_P_NODE_62274_length_174_cov_2.527559_g61605_i0 PRJNA1022392 62274 174 2.527559 4.39795266 Chloroflexia bacterium 2448782 Bacteria Bacteria 58.5 3.58e-8   NR MBA2595345.1 2448782 g61605 i0 62.8 0.741379310344828 43 15 74.1 1 132 4 12 53 MBA2595345.1 sensor histidine kinase [Chloroflexia bacterium] diamond 129 58.5 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
31140423 31140423 PRJNA1022392_P_NODE_28675_length_206_cov_4.257862_g28006_i0 PRJNA1022392 28675 206 4.257862 8.77119572 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 64.3 5.62e-10   NR MCS5643280.1 2026734 g28006 i0 87.5 0.932038834951456 32 4 46.6 0 205 110 308 339 MCS5643280.1 hypothetical protein [Dehalococcoidia bacterium] diamond 192 64.3 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
31457177 31457177 PRJNA1022392_P_NODE_49916_length_190_cov_2.993007_g49247_i0 PRJNA1022392 49916 190 2.993007 5.6867133 Herpetosiphonaceae bacterium 2720503 Bacteria Bacteria 43.1 0.00298   NR HZG67370.1 2720503 g49247 i0 87 0.363157894736842 23 3 36.3 0 120 188 1 23 HZG67370.1 hypothetical protein [Herpetosiphonaceae bacterium] diamond 69 43.1 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae   Herpetosiphonaceae bacterium
31646668 31646668 PRJNA1022392_P_NODE_42617_length_195_cov_3.445946_g41948_i0 PRJNA1022392 42617 195 3.445946 6.7195947 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.4 0.0277   NR MCY4576386.1 2026724 g41948 i0 47.7 0.676923076923077 44 23 67.7 0 49 180 335 378 MCY4576386.1 winged helix DNA-binding domain-containing protein [Chloroflexota bacterium] diamond 132 42.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31836413 31836413 PRJNA1022392_P_NODE_36177_length_205_cov_4.917722_g35508_i0 PRJNA1022392 36177 205 4.917722 10.0813301 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 58.9 4.21e-8   NR HKO32184.1 3047546 g35508 i0 100 0.453658536585366 31 0 45.4 0 111 203 24 54 HKO32184.1 chloride channel protein [Candidatus Limnocylindria bacterium] diamond 93 58.9 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
32153047 32153047 PRJNA1022392_P_NODE_34938_length_206_cov_2.402516_g34269_i0 PRJNA1022392 34938 206 2.402516 4.94918296 Chloroflexota bacterium 2026724 Bacteria Bacteria 63.5 1.03e-9   NR MBV9896067.1 2026724 g34269 i0 73 4.38349514563107 37 10 53.9 0 204 94 412 448 MBV9896067.1 amidohydrolase family protein [Chloroflexota bacterium] diamond 903 63.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32184796 32184796 PRJNA1022392_P_NODE_78958_length_158_cov_1.594595_g78289_i0 PRJNA1022392 78958 158 1.594595 2.5194601 Chloroflexota bacterium 2026724 Bacteria Bacteria 112 6.300000000000001e-28   NR MDQ2682420.1 2026724 g78289 i0 94.1 3.87341772151899 51 3 96.8 0 153 1 77 127 MDQ2682420.1 tartrate dehydrogenase [Chloroflexota bacterium] diamond 612 112 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32501310 32501310 PRJNA1022392_P_NODE_74119_length_162_cov_0.886957_g73450_i0 PRJNA1022392 74119 162 0.886957 1.43687034 Anaerolineales bacterium 2073117 Bacteria Bacteria 45.1 0.00187   NR MCC7358156.1 2073117 g73450 i0 53.3 0.833333333333333 45 21 83.3 0 157 23 305 349 MCC7358156.1 DUF4129 domain-containing protein [Anaerolineales bacterium] diamond 135 45.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32753300 32753300 PRJNA1022392_P_NODE_82400_length_154_cov_3.093458_g81731_i0 PRJNA1022392 82400 154 3.093458 4.76392532 Candidatus Chloroheliaceae bacterium 3139185 Bacteria Bacteria 51.6 7.25e-6   NR MEI6045055.1 3139185 g81731 i0 71.9 0.623376623376623 32 9 62.3 0 59 154 1 32 MEI6045055.1 protein-glutamate O-methyltransferase CheR [Candidatus Chloroheliaceae bacterium] diamond 96 51.6 1 Bacteria   Bacillati Chloroflexota Chloroflexia Candidatus Chloroheliales Candidatus Chloroheliaceae   Candidatus Chloroheliaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;