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contig_metadata

11 rows where bioproject = "PRJNA1022392" and tax_clade = "Sar"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 11 ✖

bioproject 1

  • PRJNA1022392 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6540588 6540588 PRJNA1022392_P_NODE_61506_length_175_cov_2.531250_g60837_i0 PRJNA1022392 61506 175 2.53125 4.4296875 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 95.5 3.94e-21   NR KAJ1436418.1 483371 g60837 i0 75.4 1.95428571428571 57 14 97.7 0 171 1 597 653 KAJ1436418.1 DNA topoisomerase [Ochromonadaceae sp. CCMP2298] diamond 342 95.5 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
18013728 18013728 PRJNA1022392_P_NODE_20575_length_235_cov_1.510638_g19906_i0 PRJNA1022392 20575 235 1.510638 3.5499993 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 344 3.0999999999999993e-90   NTclustered gi|820695469|tpe|LN714488.1| 572307 g19906 i0 93.191 40.0085106382979 235 15 100 1 1 235 300544 300311 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 9402 344 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
21839312 21839312 PRJNA1022392_P_NODE_65838_length_170_cov_1.292683_g65169_i0 PRJNA1022392 65838 170 1.292683 2.1975611 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 207 2.87e-49   NTclustered gi|820695469|tpe|LN714488.1| 572307 g65169 i0 89.697 1.93529411764706 165 14 97 3 6 169 80573 80411 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 329 207 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
27351352 27351352 PRJNA1022392_P_NODE_72903_length_163_cov_0.870690_g72234_i0 PRJNA1022392 72903 163 0.87069 1.4192247 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 79.3 4.61e-16   NR AAP34626.1 227086 g72234 i0 72.2 487.98773006135 54 15 99.4 0 162 1 183 236 AAP34626.1 ubiquitin/actin fusion protein 3, partial [Bigelowiella natans] diamond 79542 79.3 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
28266522 28266522 PRJNA1022392_P_NODE_20846_length_233_cov_2.688172_g20177_i0 PRJNA1022392 20846 233 2.688172 6.26344076 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.045   NR MES1908551.1 1215613 g20177 i0 46.9 0.630901287553648 49 24 63.1 2 19 165 528 574 MES1908551.1 hypothetical protein [Cercozoa sp. M6MM] diamond 147 42.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
28993277 28993277 PRJNA1022392_P_NODE_43088_length_195_cov_3.168919_g42419_i0 PRJNA1022392 43088 195 3.168919 6.17939205 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 48.1 2.58e-4   NR KAG7352398.1 303405 g42419 i0 27.3 6.63076923076923 121 32 100 1 195 1 2238 2358 KAG7352398.1 reverse transcriptase RNA-dependent DNA polymerase [Nitzschia inconspicua] diamond 1293 48.1 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
28993284 28993284 PRJNA1022392_P_NODE_81948_length_155_cov_2.601852_g81279_i0 PRJNA1022392 81948 155 2.601852 4.0328706 Triparma columacea 722753 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.00607   NR GMI43710.1 722753 g81279 i0 54.3 1.35483870967742 35 16 67.7 0 51 155 184 218 GMI43710.1 hypothetical protein TrCOL_g11677 [Triparma columacea] diamond 210 43.5 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma columacea
30414432 30414432 PRJNA1022392_P_NODE_30893_length_206_cov_3.352201_g30224_i0 PRJNA1022392 30893 206 3.352201 6.90553406 Tribonema minus 303371 SAR_Eukaryotes SAR_Eukaryotes 46.6 9.78e-4   NR KAG5183441.1 303371 g30224 i0 81.5 0.393203883495146 27 5 39.3 0 110 190 266 292 KAG5183441.1 ferritin-like superfamily [Tribonema minus] diamond 81 46.6 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema minus
31109078 31109078 PRJNA1022392_P_NODE_53055_length_186_cov_1.920863_g52386_i0 PRJNA1022392 53055 186 1.920863 3.57280518 Ectocarpus siliculosus 2880 SAR_Eukaryotes SAR_Eukaryotes 73.2 3.19e-13   NR CBN76281.1 2880 g52386 i0 56.7 1.93548387096774 60 26 96.8 0 184 5 183 242 CBN76281.1 conserved unknown protein [Ectocarpus siliculosus] diamond 360 73.2 1 Eukaryota Sar     Phaeophyceae Ectocarpales Ectocarpaceae Ectocarpus Ectocarpus siliculosus
31773263 31773263 PRJNA1022392_P_NODE_56857_length_181_cov_2.701493_g56188_i0 PRJNA1022392 56857 181 2.701493 4.88970233 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 97.4 4.61e-22   NR YP_009118077.1 372086 g56188 i0 81.7 0.994475138121547 60 11 99.4 0 180 1 232 291 YP_009118077.1 ATP synthase F1 subunit alpha [Paracercomonas marina] diamond 180 97.4 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
32721834 32721834 PRJNA1022392_P_NODE_67940_length_167_cov_2.266667_g67271_i0 PRJNA1022392 67940 167 2.266667 3.78533389 Cladocopium goreaui 2562237 SAR_Eukaryotes SAR_Eukaryotes 42 0.0252   NR CAL1153044.1 2562237 g67271 i0 44.7 0.844311377245509 47 26 84.4 0 2 142 86 132 CAL1153044.1 unnamed protein product [Cladocopium goreaui] diamond 141 42 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Cladocopium Cladocopium goreaui

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;