RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1022392", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 3 ✖

bioproject 1

  • PRJNA1022392 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26877071 26877071 PRJNA1022392_P_NODE_75821_length_160_cov_2.858407_g75152_i0 PRJNA1022392 75821 160 2.858407 4.5734512 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 86.3 7.78e-19   NR MCX5703968.1 2035772 g75152 i0 83 0.99375 53 9 99.4 0 2 160 14 66 MCX5703968.1 cobalt ECF transporter T component CbiQ [Candidatus Omnitrophota bacterium] diamond 159 86.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29869210 29869210 PRJNA1022392_P_NODE_35471_length_206_cov_2.213836_g34802_i0 PRJNA1022392 35471 206 2.213836 4.56050216 Bacteria 2 Bacteria Bacteria 51.2 2.34e-5   NR OGX12420.1 1801835 g34802 i0 57.1 1.52912621359223 35 15 51 0 97 201 384 418 OGX12420.1 MAG: hypothetical protein A2351_01215 [Omnitrophica bacterium RIFOXYB12_FULL_50_7] diamond 315 51.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium RIFOXYB12_FULL_50_7
32438040 32438040 PRJNA1022392_P_NODE_71939_length_163_cov_2.767241_g71270_i0 PRJNA1022392 71939 163 2.767241 4.51060283 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 45.4 0.00134   NR MEK6715444.1 2035772 g71270 i0 70.4 0.496932515337423 27 8 49.7 0 149 69 5 31 MEK6715444.1 SIR2 family protein [Candidatus Omnitrophota bacterium] diamond 81 45.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;