RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1022392", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1022392 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27098151 27098151 PRJNA1022392_P_NODE_34622_length_206_cov_2.484277_g33953_i0 PRJNA1022392 34622 206 2.484277 5.11761062 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 73.2 4.24e-13   NR KAH9262369.1 1357716 g33953 i0 93.8 0.466019417475728 32 2 46.6 0 204 109 449 480 KAH9262369.1 hypothetical protein BASA82_000587 [Batrachochytrium salamandrivorans] diamond 96 73.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
28582627 28582627 PRJNA1022392_P_NODE_78527_length_158_cov_2.702703_g77858_i0 PRJNA1022392 78527 158 2.702703 4.27027074 Podochytrium sp. JEL 2750441 Fungi Fungi 83.6 4.74e-17   NR KAJ3061777.1 2724200 g77858 i0 78.8 0.987341772151899 52 11 98.7 0 158 3 70 121 KAJ3061777.1 ATPdependent RNA helicase, partial [Podochytrium sp. JEL0797] diamond 156 83.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Podochytrium Podochytrium sp. JEL0797

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;