RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1022139", tax_phylum = "Candidatus Sumerlaeota" and tax_superkingdom = "Bacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Candidatus Sumerlaeota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20562775 20562775 PRJNA1022139_P_NODE_22217_length_297_cov_4.111607_g22112_i0 PRJNA1022139 22217 297 4.111607 12.21147279 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 167 1.2499999999999998e-47   NR MCC5876088.1 2715255 g22112 i0 75.5 7.91919191919192 98 24 99 0 296 3 351 448 MCC5876088.1 asparagine--tRNA ligase [Candidatus Sumerlaeia bacterium] diamond 2352 167 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
31014376 31014376 PRJNA1022139_P_NODE_19415_length_317_cov_1.204918_g19310_i0 PRJNA1022139 19415 317 1.204918 3.81959006 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 43.5 0.0419   NR MBN1516253.1 2107588 g19310 i0 29.5 0.899053627760252 95 65 89.9 1 23 307 16 108 MBN1516253.1 fructosamine kinase family protein [Candidatus Sumerlaeota bacterium] diamond 285 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;