RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1022139" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28519406 28519406 PRJNA1022139_P_NODE_19567_length_316_cov_0.950617_g19462_i0 PRJNA1022139 19567 316 0.950617 3.00394972 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 75.9 1.56e-13   NR MBI4588610.1 2053607 g19462 i0 46.2 0.882911392405063 93 45 88.3 2 281 3 169 256 MBI4588610.1 ketoacyl-ACP synthase III [Candidatus Rokuibacteriota bacterium] diamond 279 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30066452 30066452 PRJNA1022139_P_NODE_29172_length_270_cov_1.243655_g29067_i0 PRJNA1022139 29172 270 1.243655 3.3578685 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 48.1 2.92e-4   NR MBI4610830.1 2053607 g29067 i0 38.1 0.933333333333333 84 50 91.1 1 18 263 19 102 MBI4610830.1 cyclic nucleotide-binding domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 252 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32057992 32057992 PRJNA1022139_P_NODE_15518_length_348_cov_2.050909_g15413_i0 PRJNA1022139 15518 348 2.050909 7.13716332 Candidatus Rokubacteria bacterium RIFCSPLOWO2_ 1802106 Bacteria Bacteria 43.9 0.0459   NR OGL12299.1 1802106 g15413 i0 28 0.706896551724138 82 51 70.7 1 344 99 246 319 OGL12299.1 MAG: hypothetical protein A3I17_10865 [Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_72_37] diamond 246 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_72_37
32113617 32113617 PRJNA1022139_P_NODE_7518_length_479_cov_1.504926_g7413_i0 PRJNA1022139 7518 479 1.504926 7.20859554 Bacteria 2 Bacteria Bacteria 201 8.62e-58   NR MBI3635141.1 2053607 g7413 i0 59.9 4.92275574112735 157 60 98.3 1 475 5 462 615 MBI3635141.1 enoyl-CoA hydratase/isomerase family protein [Candidatus Rokuibacteriota bacterium] diamond 2358 201 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;