RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1022139" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27690944 27690944 PRJNA1022139_P_NODE_8604_length_450_cov_2.381963_g8499_i0 PRJNA1022139 8604 450 2.381963 10.7188335 Bacteria 2 Bacteria Bacteria 45.8 0.024   NR MYF55083.1 2026781 g8499 i0 32 1.66 122 71 81.3 5 392 27 279 388 MYF55083.1 PQQ-binding-like beta-propeller repeat protein [Candidatus Poribacteria bacterium] diamond 747 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32501280 32501280 PRJNA1022139_P_NODE_6359_length_519_cov_1.035874_g6255_i0 PRJNA1022139 6359 519 1.035874 5.37618606 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 75.5 2.51e-12   NR MBB16588.1 2026781 g6255 i0 53.7 0.38728323699422 67 31 38.7 0 500 300 557 623 MBB16588.1 methionine--tRNA ligase [Candidatus Poribacteria bacterium] diamond 201 75.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32564618 32564618 PRJNA1022139_P_NODE_7239_length_489_cov_1.375000_g7134_i0 PRJNA1022139 7239 489 1.375 6.72375 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 66.2 4.6e-10   NR MCZ6678516.1 2026781 g7134 i0 40 0.950920245398773 80 45 49.1 1 482 243 103 179 MCZ6678516.1 GNAT family N-acetyltransferase [Candidatus Poribacteria bacterium] diamond 465 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;