RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1022139" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27256147 27256147 PRJNA1022139_P_NODE_22123_length_298_cov_1.466667_g22018_i0 PRJNA1022139 22123 298 1.466667 4.37066766 Candidatus Binatus sp. 2811406 Bacteria Bacteria 41.6 0.0246   NR MDB5108570.1 2811406 g22018 i0 44.4 0.453020134228188 45 22 42.3 1 290 165 25 69 MDB5108570.1 hypothetical protein [Candidatus Binatus sp.] diamond 135 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.
30224487 30224487 PRJNA1022139_P_NODE_7132_length_491_cov_2.983254_g7027_i0 PRJNA1022139 7132 491 2.983254 14.64777714 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 138 1.26e-37   NR MET0151620.1 2838779 g7027 i0 48.2 2.02851323828921 164 79 96.5 3 490 17 8 171 MET0151620.1 glutathione S-transferase [Candidatus Binatia bacterium] diamond 996 138 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31425310 31425310 PRJNA1022139_P_NODE_14376_length_360_cov_1.303136_g14271_i0 PRJNA1022139 14376 360 1.303136 4.6912896 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 60.5 8.67e-8   NR HEY1266910.1 2838779 g14271 i0 43.3 0.558333333333333 67 35 55.8 2 359 159 765 828 HEY1266910.1 Ig-like domain-containing protein [Candidatus Binatia bacterium] diamond 201 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32406200 32406200 PRJNA1022139_P_NODE_40859_length_243_cov_1.605882_g40754_i0 PRJNA1022139 40859 243 1.605882 3.90229326 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 50.8 5.31e-5   NR MCS6926064.1 2838779 g40754 i0 45.2 0.901234567901235 73 31 90.1 1 240 22 140 203 MCS6926064.1 heat shock 70 family protein [Candidatus Binatia bacterium] diamond 219 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;