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contig_metadata

15 rows where bioproject = "PRJNA1022139" and tax_kingdom = "Thermotogati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 15 ✖

bioproject 1

  • PRJNA1022139 · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1003625 1003625 PRJNA1022139_P_NODE_35181_length_250_cov_0.870056_g35076_i0 PRJNA1022139 35181 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 60.2 1.35e-4   NTclustered gi|2281898193|dbj|AP026561.1| 200252 g35076 i0 97.143 1.616 35 1 14 0 112 146 557645 557679 Deinococcus aetherius ST0316 plasmid pDAETH-1 DNA, complete genome blastn 404 60.2 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aetherius
6539821 6539821 PRJNA1022139_P_NODE_22366_length_297_cov_1.013393_g22261_i0 PRJNA1022139 22366 297 1.013393 3.00977721 Deinococcus irradiatisoli 2202254 Bacteria Bacteria 56.5 0.002   NTclustered gi|1392964945|gb|CP029494.1| 2202254 g22261 i0 100 0.101010101010101 30 0 10 0 52 81 933320 933349 Deinococcus irradiatisoli strain 17bor-2 chromosome, complete genome blastn 30 56.5 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus irradiatisoli
13756991 13756991 PRJNA1022139_P_NODE_38371_length_246_cov_1.780347_g38266_i0 PRJNA1022139 38371 246 1.780347 4.37965362 Thermus 270 Bacteria Bacteria 52.8 0.022   NTclustered gi|320149275|gb|CP001962.1| 743525 g38266 i0 100 0.341463414634146 28 0 11 0 2 29 2011832 2011805 Thermus scotoductus SA-01, complete genome blastn 84 52.8 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus scotoductus
14190264 14190264 PRJNA1022139_P_NODE_24132_length_288_cov_1.125581_g24027_i0 PRJNA1022139 24132 288 1.125581 3.24167328 Trueperaceae bacterium 2026798 Bacteria Bacteria 52.8 0.027   NTclustered gi|2621701816|emb|OY759346.1| 2026798 g24027 i0 96.774 0.107638888888889 31 1 11 0 151 181 3065471 3065501 MAG: Trueperaceae bacterium isolate dd143a13-9bf8-4812-ba0e-a3cf349d91ff genome assembly, chromosome: 1 blastn 31 52.8 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
18013639 18013639 PRJNA1022139_P_NODE_715_length_1326_cov_6.150838_g94_i1 PRJNA1022139 715 1326 6.150838 81.56011188 Deinococcus radiophilus 32062 Bacteria Bacteria 56.5 0.01   NTclustered gi|2152123021|gb|CP086380.1| 32062 g94 i1 96.97 0.0248868778280543 33 1 2 0 1217 1249 815816 815784 Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome blastn 33 56.5 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiophilus
23113958 23113958 PRJNA1022139_P_NODE_31419_length_261_cov_1.914894_g31314_i0 PRJNA1022139 31419 261 1.914894 4.99787334 FCB group 1783270 Bacteria Bacteria 131 2.58e-33   NR WP_293913574.1 47478 g31314 i0 74.4 13.7701149425287 86 22 98.9 0 3 260 683 768 WP_293913574.1 aminomethyl-transferring glycine dehydrogenase [Deinococcus sp.] diamond 3594 132 0.992424242424242 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp.
23114122 23114122 PRJNA1022139_P_NODE_99_length_2294_cov_6.821702_g94_i0 PRJNA1022139 99 2294 6.821702 156.48984388 Deinococcus radiophilus 32062 Bacteria Bacteria 56.5 0.018   NTclustered gi|2152123021|gb|CP086380.1| 32062 g94 i0 96.97 0.0143853530950305 33 1 1 0 1217 1249 815816 815784 Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome blastn 33 56.5 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiophilus
23955899 23955899 PRJNA1022139_P_NODE_2659_length_760_cov_4.250364_g2569_i0 PRJNA1022139 2659 760 4.250364 32.3027664 root 1 Root_unresolved Root_unresolved 296 7.74e-98   NR WP_303102018.1 47478 g2569 i0 64.5 37.7723684210526 245 86 96.3 1 5 736 8 252 WP_303102018.1 3-hydroxyacyl-CoA dehydrogenase [Deinococcus sp.] diamond 28707 296 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp.
27161096 27161096 PRJNA1022139_P_NODE_41162_length_243_cov_0.905882_g41057_i0 PRJNA1022139 41162 243 0.905882 2.20129326 Deinococcota bacterium 1913990 Bacteria Bacteria 131 5.95e-37   NR MDQ3459620.1 1913990 g41057 i0 75.9 0.975308641975309 79 19 97.5 0 240 4 13 91 MDQ3459620.1 HIT family protein [Deinococcota bacterium] diamond 237 131 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
27446067 27446067 PRJNA1022139_P_NODE_36083_length_249_cov_0.875000_g35978_i0 PRJNA1022139 36083 249 0.875 2.17875 Deinococcus sp. JMULE3 2518341 Bacteria Bacteria 42.7 0.0225   NR WP_174367002.1 2518341 g35978 i0 50 0.578313253012048 48 23 57.8 1 32 175 103 149 WP_174367002.1 hypothetical protein [Deinococcus sp. JMULE3] diamond 144 42.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. JMULE3
28171947 28171947 PRJNA1022139_P_NODE_31166_length_262_cov_1.888889_g31061_i0 PRJNA1022139 31166 262 1.888889 4.94888918 Deinococcus aerophilus 522488 Bacteria Bacteria 42.7 0.0468   NR WP_188904705.1 522488 g31061 i0 34.9 0.984732824427481 86 56 98.5 0 1 258 65 150 WP_188904705.1 murein hydrolase activator EnvC family protein [Deinococcus aerophilus] diamond 258 42.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aerophilus
29332413 29332413 PRJNA1022139_P_NODE_39169_length_245_cov_1.790698_g39064_i0 PRJNA1022139 39169 245 1.790698 4.3872101 root 1 Root_unresolved Root_unresolved 161 4.98e-44   NR 1TAQ_A 271 g39064 i0 100 4.95918367346939 81 0 99.2 0 245 3 409 489 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 1215 161 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
30288081 30288081 PRJNA1022139_P_NODE_18552_length_323_cov_1.236000_g18447_i0 PRJNA1022139 18552 323 1.236 3.99228 Deinococcus peraridilitoris 432329 Bacteria Bacteria 78.6 2.01e-15   NR WP_041232012.1 432329 g18447 i0 39.5 1.05882352941176 114 58 97.5 4 321 7 20 131 WP_041232012.1 SMI1/KNR4 family protein [Deinococcus peraridilitoris] diamond 342 78.6 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus peraridilitoris
30627285 30627285 PRJNA1022139_P_NODE_29233_length_270_cov_0.908629_g29128_i0 PRJNA1022139 29233 270 0.908629 2.4532983 Deinococcus 1298 Bacteria Bacteria 78.2 1.83e-14   NR WP_189071607.1 1867090 g29128 i0 42.7 4.91111111111111 89 51 98.9 0 1 267 208 296 WP_189071607.1 BTAD domain-containing putative transcriptional regulator [Deinococcus sedimenti] diamond 1326 78.6 0.994910941475827 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sedimenti
31362298 31362298 PRJNA1022139_P_NODE_24736_length_285_cov_3.792453_g24631_i0 PRJNA1022139 24736 285 3.792453 10.80849105 Aminobacterium mobile 81467 Bacteria Bacteria 44.7 0.0124   NR WP_024822765.1 81467 g24631 i0 47.8 0.484210526315789 46 23 48.4 1 6 143 450 494 WP_024822765.1 DUF4139 domain-containing protein [Aminobacterium mobile] diamond 138 44.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminobacterium Aminobacterium mobile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;