RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1022139", tax_kingdom = "Thermoproteati" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA1022139 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21838357 21838357 PRJNA1022139_P_NODE_12098_length_387_cov_0.980892_g11993_i0 PRJNA1022139 12098 387 0.980892 3.79605204 Metallosphaera 41980 Archaea Archaea 181 1.7e-55   NR WP_048057560.1 41980 g11993 i0 64.8 9.91472868217054 125 44 96.9 0 1 375 8 132 WP_048057560.1 MULTISPECIES: peptide-methionine (S)-S-oxide reductase MsrA [Metallosphaera] diamond 3837 181 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Metallosphaera  
29119467 29119467 PRJNA1022139_P_NODE_42889_length_241_cov_0.916667_g42784_i0 PRJNA1022139 42889 241 0.916667 2.20916747 Sulfolobales archaeon HS-7 2823152 Archaea Archaea 65.1 3.19e-11   NR BCU66956.1 2823152 g42784 i0 46.3 0.83402489626556 67 33 83.4 2 201 1 5 68 BCU66956.1 endoribonuclease [Sulfolobales archaeon HS-7] diamond 201 65.1 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales     Sulfolobales archaeon HS-7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;