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contig_metadata

27 rows where bioproject = "PRJNA1022139", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 27 ✖

tax_kingdom 1

  • Pseudomonadati · 27 ✖

bioproject 1

  • PRJNA1022139 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2712193 2712193 PRJNA1022139_P_NODE_5503_length_552_cov_5.394572_g5399_i0 PRJNA1022139 5503 552 5.394572 29.77803744 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 309 3.89e-103   NR MCB0369725.1 2053517 g5399 i0 81.4 2.91847826086957 183 34 99.5 0 551 3 11 193 MCB0369725.1 hypothetical protein [Bdellovibrionales bacterium] diamond 1611 309 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
3988211 3988211 PRJNA1022139_P_NODE_2364_length_800_cov_3.020633_g2279_i0 PRJNA1022139 2364 800 3.020633 24.165064 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 453 1.09e-156   NR MCB0368368.1 2053517 g2279 i0 83.3 0.99 264 44 99 0 1 792 45 308 MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 792 453 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
9089105 9089105 PRJNA1022139_P_NODE_11968_length_388_cov_2.438095_g11863_i0 PRJNA1022139 11968 388 2.438095 9.4598086 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 130 8.990000000000001e-36   NR MCB0370127.1 2053517 g11863 i0 90.5 0.572164948453608 74 7 57.2 0 167 388 72 145 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 222 130 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
14190173 14190173 PRJNA1022139_P_NODE_12892_length_377_cov_0.868421_g12787_i0 PRJNA1022139 12892 377 0.868421 3.27394717 Peredibacter starrii 28202 Bacteria Bacteria 477 5e-130   NTclustered gi|2631252187|gb|CP139487.1| 28202 g12787 i0 95.623 86.1803713527851 297 13 100 0 81 377 511926 512222 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 32490 477 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
18013407 18013407 PRJNA1022139_P_NODE_18895_length_320_cov_2.441296_g18790_i0 PRJNA1022139 18895 320 2.441296 7.8121472 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 177 1.0799999999999999e-54   NR MCB0370127.1 2053517 g18790 i0 86.6 0.909375 97 13 90.9 0 30 320 33 129 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 291 177 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
19287406 19287406 PRJNA1022139_P_NODE_3636_length_662_cov_1.769100_g3533_i0 PRJNA1022139 3636 662 1.7691 11.711442 Silvanigrellaceae bacterium 2654442 Bacteria Bacteria 71.2 1.39e-12   NR MBX9703359.1 2654442 g3533 i0 60.9 0.208459214501511 46 18 20.8 0 285 422 1 46 MBX9703359.1 hypothetical protein [Silvanigrellaceae bacterium] diamond 138 71.2 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae   Silvanigrellaceae bacterium
23113985 23113985 PRJNA1022139_P_NODE_36739_length_248_cov_1.760000_g36634_i0 PRJNA1022139 36739 248 1.76 4.3648 Peredibacter starrii 28202 Bacteria Bacteria 311 3.35e-80   NTclustered gi|2631252187|gb|CP139487.1| 28202 g36634 i0 89.474 86.633064516129 247 25 99 1 1 247 511219 510974 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 21485 311 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
24387785 24387785 PRJNA1022139_P_NODE_32200_length_258_cov_1.664865_g32095_i0 PRJNA1022139 32200 258 1.664865 4.2953517 Peredibacter sp. HCB2-198 3383025 Bacteria Bacteria 305 1.63e-78   NTclustered gi|2867657404|gb|CP174607.1| 3383025 g32095 i0 88.213 183.232558139535 263 22 100 9 1 258 1292298 1292556 Peredibacter sp. HCB2-198 chromosome, complete genome blastn 47274 305 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter sp. HCB2-198
26837361 26837361 PRJNA1022139_P_NODE_24461_length_286_cov_2.892019_g24356_i0 PRJNA1022139 24461 286 2.892019 8.27117434 Bacteria 2 Bacteria Bacteria 66.6 1.86e-10   NR MFN8791299.1 2053517 g24356 i0 52.9 8.89510489510489 70 32 73.4 1 1 210 32 100 MFN8791299.1 DnaJ C-terminal domain-containing protein [Bdellovibrionales bacterium] diamond 2544 67 0.994029850746269 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27034926 27034926 PRJNA1022139_P_NODE_32122_length_258_cov_2.464865_g32017_i0 PRJNA1022139 32122 258 2.464865 6.3593517 Bacteriovorax sp. 2608087 Bacteria Bacteria 112 5.2e-27   NR MBC7539925.1 2608087 g32017 i0 64.6 3.7093023255814 79 28 91.9 0 240 4 129 207 MBC7539925.1 glutamine synthetase [Bacteriovorax sp.] diamond 957 112 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp.
27540559 27540559 PRJNA1022139_P_NODE_16304_length_341_cov_2.074627_g16199_i0 PRJNA1022139 16304 341 2.074627 7.07447807 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 110 1.26e-27   NR MCB0369154.1 2053517 g16199 i0 58 1.69794721407625 100 35 88 3 14 313 3 95 MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] diamond 579 110 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27730275 27730275 PRJNA1022139_P_NODE_30444_length_265_cov_1.604167_g30339_i0 PRJNA1022139 30444 265 1.604167 4.25104255 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 126 3.9e-34   NR PZP55032.1 349221 g30339 i0 74 0.871698113207547 77 20 87.2 0 6 236 149 225 PZP55032.1 MAG: orotate phosphoribosyltransferase [Micavibrio aeruginosavorus] diamond 231 126 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
27887720 27887720 PRJNA1022139_P_NODE_32585_length_257_cov_1.255435_g32480_i0 PRJNA1022139 32585 257 1.255435 3.22646795 Bacteriovoracales bacterium 2497611 Bacteria Bacteria 54.3 9.27e-7   NR MFI5391501.1 2497611 g32480 i0 56.1 0.478599221789883 41 14 43.2 1 112 2 48 88 MFI5391501.1 phospholipase A2 [Bacteriovoracales bacterium] diamond 123 54.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales     Bacteriovoracales bacterium
28645726 28645726 PRJNA1022139_P_NODE_30067_length_266_cov_3.968912_g29962_i0 PRJNA1022139 30067 266 3.968912 10.55730592 Oligoflexia bacterium 2599941 Bacteria Bacteria 53.9 5.41e-6   NR MBF0311945.1 2599941 g29962 i0 45.6 0.766917293233083 68 33 72.2 3 72 263 1 68 MBF0311945.1 SPASM domain-containing protein [Oligoflexia bacterium] diamond 204 53.9 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
29245526 29245526 PRJNA1022139_P_NODE_2129_length_842_cov_3.031209_g2047_i0 PRJNA1022139 2129 842 3.031209 25.52277978 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 375 1.64e-129   NR MBX9767865.1 2053517 g2047 i0 90.5 0.716152019002375 201 19 71.6 0 206 808 1 201 MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] diamond 603 375 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29308581 29308581 PRJNA1022139_P_NODE_43409_length_237_cov_2.262195_g43304_i0 PRJNA1022139 43409 237 2.262195 5.36140215 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 58.9 1.2e-8   NR MCB0368043.1 2053517 g43304 i0 70 0.506329113924051 40 12 50.6 0 1 120 110 149 MCB0368043.1 50S ribosomal protein L4 [Bdellovibrionales bacterium] diamond 120 58.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29782225 29782225 PRJNA1022139_P_NODE_2051_length_856_cov_3.162197_g1970_i0 PRJNA1022139 2051 856 3.162197 27.06840632 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 69.3 2.58e-9   NR MEK6627027.1 3034175 g1970 i0 36.8 0.371495327102804 106 66 37.1 1 319 2 61 165 MEK6627027.1 alkaline phosphatase family protein [Bdellovibrionota bacterium] diamond 318 69.3 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
29877110 29877110 PRJNA1022139_P_NODE_30631_length_264_cov_2.015707_g30526_i0 PRJNA1022139 30631 264 2.015707 5.32146648 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 89.4 3.96e-19   NR MCB0369784.1 2053517 g30526 i0 56.5 0.965909090909091 85 35 96.6 1 8 262 88 170 MCB0369784.1 insulinase family protein [Bdellovibrionales bacterium] diamond 255 89.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30098060 30098060 PRJNA1022139_P_NODE_36192_length_249_cov_0.875000_g36087_i0 PRJNA1022139 36192 249 0.875 2.17875 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 75.1 1.09e-15   NR MCB0371200.1 2053517 g36087 i0 71.7 1.51807228915663 60 13 72.3 1 211 32 15 70 MCB0371200.1 hypothetical protein [Bdellovibrionales bacterium] diamond 378 75.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30659006 30659006 PRJNA1022139_P_NODE_12753_length_378_cov_2.268852_g12648_i0 PRJNA1022139 12753 378 2.268852 8.57626056 Bacteria 2 Bacteria Bacteria 62 9.58e-10   NR PWU12825.1 28201 g12648 i0 45.8 9 59 32 46.8 0 1 177 27 85 PWU12825.1 MAG: 30S ribosomal protein S15 [Bdellovibrio sp.] diamond 3402 62 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
31195765 31195765 PRJNA1022139_P_NODE_27555_length_276_cov_1.019704_g27450_i0 PRJNA1022139 27555 276 1.019704 2.81438304 Bdellovibrio 958 Bacteria Bacteria 48.5 4.98e-4   NR MEI7974133.1 28201 g27450 i0 61.3 0.673913043478261 31 12 33.7 0 2 94 529 559 MEI7974133.1 peptide ABC transporter substrate-binding protein [Bdellovibrio sp.] diamond 186 48.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
31267287 31267287 PRJNA1022139_P_NODE_39935_length_244_cov_2.257310_g39830_i0 PRJNA1022139 39935 244 2.25731 5.5078364 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 62.8 4.69e-11   NR MCB0369687.1 2053517 g39830 i0 53.3 0.55327868852459 45 21 55.3 0 37 171 4 48 MCB0369687.1 hypothetical protein [Bdellovibrionales bacterium] diamond 135 62.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31552162 31552162 PRJNA1022139_P_NODE_3556_length_668_cov_2.077311_g3454_i0 PRJNA1022139 3556 668 2.077311 13.87643748 Bacteriovorax stolpii 960 Bacteria Bacteria 311 2.68e-103   NR WP_142409471.1 960 g3454 i0 70.9 2.87874251497006 213 62 95.7 0 28 666 3 215 WP_142409471.1 adenosine kinase [Bacteriovorax stolpii] diamond 1923 311 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
31552171 31552171 PRJNA1022139_P_NODE_39696_length_245_cov_0.895349_g39591_i0 PRJNA1022139 39696 245 0.895349 2.19360505 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 103 1.81e-23   NR MBS1971215.1 2053517 g39591 i0 59.5 0.96734693877551 79 32 96.7 0 241 5 43 121 MBS1971215.1 acyl-CoA dehydrogenase family protein [Bdellovibrionales bacterium] diamond 237 103 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32184772 32184772 PRJNA1022139_P_NODE_4398_length_610_cov_2.422719_g4294_i0 PRJNA1022139 4398 610 2.422719 14.7785859 Oligoflexus sp. 1971216 Bacteria Bacteria 109 2.1e-26   NR WP_324954760.1 1971216 g4294 i0 42.5 0.752459016393443 153 42 73.8 3 3 452 41 150 WP_324954760.1 hypothetical protein [Oligoflexus sp.] diamond 459 109 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
32303652 32303652 PRJNA1022139_P_NODE_14479_length_359_cov_1.076923_g14374_i0 PRJNA1022139 14479 359 1.076923 3.86615357 root 1 Root_unresolved Root_unresolved 80.1 1.15e-14   NR MBC7741559.1 28201 g14374 i0 38.5 3.26740947075209 96 57 78.6 2 3 284 118 213 MBC7741559.1 aminopeptidase N [Bdellovibrio sp.] diamond 1173 80.9 0.990111248454882 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
32721800 32721800 PRJNA1022139_P_NODE_41040_length_243_cov_0.905882_g40935_i0 PRJNA1022139 41040 243 0.905882 2.20129326 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 45.4 0.00403   NR MEK6623678.1 3034175 g40935 i0 35.7 0.691358024691358 56 36 69.1 0 62 229 26 81 MEK6623678.1 hypothetical protein [Bdellovibrionota bacterium] diamond 168 45.4 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;