RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1022139", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28258727 28258727 PRJNA1022139_P_NODE_33446_length_254_cov_1.127072_g33341_i0 PRJNA1022139 33446 254 1.127072 2.86276288 Eukaryota 2759 Fungi Fungi 82.4 9.09e-17   NR KAG5456631.1 278681 g33341 i0 46.9 5.74015748031496 81 42 94.5 1 12 251 135 215 KAG5456631.1 MAG: hypothetical protein BJ554DRAFT_3577 [Olpidium bornovanus] diamond 1458 82.4 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
32058022 32058022 PRJNA1022139_P_NODE_33578_length_253_cov_1.694444_g33473_i0 PRJNA1022139 33578 253 1.694444 4.28694332 Olpidium bornovanus 278681 Fungi Fungi 94 9.89e-23   NR KAG5457540.1 278681 g33473 i0 56 3.98418972332016 84 36 99.6 1 1 252 24 106 KAG5457540.1 MAG: calmodulin 1 [Olpidium bornovanus] diamond 1008 94 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;