RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1022139", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28234849 28234849 PRJNA1022139_P_NODE_14186_length_362_cov_1.065744_g14081_i0 PRJNA1022139 14186 362 1.065744 3.85799328 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 79 2.94e-14   NR PJF19891.1 1246581 g14081 i0 33.1 0.977900552486188 118 77 97.8 1 357 4 313 428 PJF19891.1 hypothetical protein PSACC_00279, partial [Paramicrosporidium saccamoebae] diamond 354 79 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30793189 30793189 PRJNA1022139_P_NODE_8414_length_455_cov_1.405759_g8309_i0 PRJNA1022139 8414 455 1.405759 6.39620345 Rozella allomycis CSF55 988480 Fungi Fungi 65.1 5.95e-9   NR RKP17629.1 988480 g8309 i0 30.1 1.00879120879121 153 99 95.6 3 14 448 433 585 RKP17629.1 hypothetical protein ROZALSC1DRAFT_30593 [Rozella allomycis CSF55] diamond 459 65.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32343117 32343117 PRJNA1022139_P_NODE_4919_length_581_cov_1.909449_g4815_i0 PRJNA1022139 4919 581 1.909449 11.09389869 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 197 2.0099999999999997e-57   NR PJF19089.1 1246581 g4815 i0 56.6 0.975903614457831 189 72 97.6 3 581 15 233 411 PJF19089.1 Glycerol-3-phosphate dehydrogenase [NAD(+)], partial [Paramicrosporidium saccamoebae] diamond 567 197 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;