RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1022139", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJNA1022139 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27603849 27603849 PRJNA1022139_P_NODE_16144_length_343_cov_1.140741_g16039_i0 PRJNA1022139 16144 343 1.140741 3.91274163 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 41.6 0.0353   NR GIX48216.1 2528274 g16039 i0 56.4 0.341107871720117 39 17 34.1 0 293 177 7 45 GIX48216.1 MAG: hypothetical protein KatS3mg131_2427 [Candidatus Tectimicrobiota bacterium] diamond 117 41.6 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
32216383 32216383 PRJNA1022139_P_NODE_8918_length_443_cov_2.227027_g8813_i0 PRJNA1022139 8918 443 2.227027 9.86572961 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 46.2 0.0162   NR MBI3091588.1 2528274 g8813 i0 36.1 1.12415349887133 61 37 41.3 1 339 157 73 131 MBI3091588.1 cytochrome c3 family protein [Candidatus Tectimicrobiota bacterium] diamond 498 46.2 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
32721774 32721774 PRJNA1022139_P_NODE_29180_length_270_cov_1.197970_g29075_i0 PRJNA1022139 29180 270 1.19797 3.234519 Nitrospinota bacterium 2026769 Bacteria Bacteria 44.7 0.0106   NR MFQ5894582.1 2026769 g29075 i0 45.7 0.511111111111111 46 25 51.1 0 18 155 187 232 MFQ5894582.1 hydantoinase B/oxoprolinase family protein [Nitrospinota bacterium] diamond 138 44.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;