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contig_metadata

30 rows where bioproject = "PRJNA1022139", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 30 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 30 ✖

bioproject 1

  • PRJNA1022139 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6539730 6539730 PRJNA1022139_P_NODE_10306_length_415_cov_1.535088_g10201_i0 PRJNA1022139 10306 415 1.535088 6.3706152 Longimicrobiales bacterium 2910168 Bacteria Bacteria 52.8 0.04   NTclustered gi|2518596698|emb|OX639991.1| 2910168 g10201 i0 100 0.0674698795180723 28 0 7 0 184 211 3242502 3242529 MAG: Longimicrobiales bacterium isolate affa3490-31b4-448a-b7fc-cc7950b7f85b genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
6539817 6539817 PRJNA1022139_P_NODE_21706_length_301_cov_1.350877_g21601_i0 PRJNA1022139 21706 301 1.350877 4.06613977 Longimicrobiales bacterium 2910168 Bacteria Bacteria 52.8 0.028   NTclustered gi|2518596698|emb|OX639991.1| 2910168 g21601 i0 100 0.0930232558139535 28 0 9 0 38 65 504173 504146 MAG: Longimicrobiales bacterium isolate affa3490-31b4-448a-b7fc-cc7950b7f85b genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
12915340 12915340 PRJNA1022139_P_NODE_25631_length_282_cov_1.875598_g25526_i0 PRJNA1022139 25631 282 1.875598 5.28918636 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 124 1.5e-31   NR HUF35033.1 2448054 g25526 i0 76.5 4.72340425531915 85 20 90.4 0 256 2 21 105 HUF35033.1 hypothetical protein [Gemmatimonadales bacterium] diamond 1332 124 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
26591494 26591494 PRJNA1022139_P_NODE_39601_length_245_cov_0.895349_g39496_i0 PRJNA1022139 39601 245 0.895349 2.19360505 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 74.3 2.86e-13   NR NNE09119.1 2026742 g39496 i0 48.7 0.930612244897959 76 36 93.1 1 12 239 8 80 NNE09119.1 selenide, water dikinase SelD [Gemmatimonadota bacterium] diamond 228 74.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
27477351 27477351 PRJNA1022139_P_NODE_35263_length_250_cov_0.870056_g35158_i0 PRJNA1022139 35263 250 0.870056 2.17514 Longimicrobium sp. 2029185 Bacteria Bacteria 49.3 1.92e-4   NR HEX8450672.1 2029185 g35158 i0 60.6 1.356 33 13 39.6 0 224 126 166 198 HEX8450672.1 PAS domain-containing protein [Longimicrobium sp.] diamond 339 49.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
27540584 27540584 PRJNA1022139_P_NODE_30744_length_264_cov_1.403141_g30639_i0 PRJNA1022139 30744 264 1.403141 3.70429224 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 45.8 0.00397   NR MFN2317514.1 2448054 g30639 i0 39.3 0.636363636363636 56 30 59.1 2 213 58 393 448 MFN2317514.1 M20/M25/M40 family metallo-hydrolase [Gemmatimonadales bacterium] diamond 168 45.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
27563992 27563992 PRJNA1022139_P_NODE_19404_length_317_cov_1.262295_g19299_i0 PRJNA1022139 19404 317 1.262295 4.00147515 Bacteria 2 Bacteria Bacteria 65.1 3.76e-10   NR HEX6965666.1 2026741 g19299 i0 42.7 6.6813880126183 96 48 90.9 1 315 28 3 91 HEX6965666.1 aquaporin [Gemmatimonadaceae bacterium] diamond 2118 65.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
27603896 27603896 PRJNA1022139_P_NODE_42164_length_242_cov_0.911243_g42059_i0 PRJNA1022139 42164 242 0.911243 2.20520806 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 68.2 3.17e-11   NR HEU4648800.1 2448054 g42059 i0 43 0.979338842975207 79 41 96.7 2 235 2 163 238 HEU4648800.1 NAD-dependent epimerase/dehydratase family protein [Gemmatimonadales bacterium] diamond 237 68.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
27698742 27698742 PRJNA1022139_P_NODE_42224_length_242_cov_0.911243_g42119_i0 PRJNA1022139 42224 242 0.911243 2.20520806 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 42.7 0.0354   NR HSE45362.1 2448054 g42119 i0 38.3 0.743801652892562 60 31 74.4 1 44 223 213 266 HSE45362.1 FAD-dependent oxidoreductase [Gemmatimonadales bacterium] diamond 180 42.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
27887725 27887725 PRJNA1022139_P_NODE_33825_length_252_cov_1.720670_g33720_i0 PRJNA1022139 33825 252 1.72067 4.3360884 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 78.6 2.18e-15   NR MEA3247279.1 2026742 g33720 i0 56.4 1.78571428571429 78 29 90.5 2 250 23 144 218 MEA3247279.1 SDR family oxidoreductase [Gemmatimonadota bacterium] diamond 450 78.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
27919302 27919302 PRJNA1022139_P_NODE_20285_length_310_cov_1.953586_g20180_i0 PRJNA1022139 20285 310 1.953586 6.0561166 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 45.4 0.00926   NR HEY0997590.1 2026741 g20180 i0 36.6 0.793548387096774 82 47 79.4 3 15 260 780 856 HEY0997590.1 Ig-like domain-containing protein [Gemmatimonadaceae bacterium] diamond 246 45.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
28258722 28258722 PRJNA1022139_P_NODE_23206_length_291_cov_2.243119_g23101_i0 PRJNA1022139 23206 291 2.243119 6.52747629 Pseudomonadati 3379134 Bacteria Bacteria 80.5 1.08e-17   NR HLQ59418.1 2448054 g23101 i0 81.8 2.82474226804124 44 8 45.4 0 9 140 21 64 HLQ59418.1 nitrilase-related carbon-nitrogen hydrolase [Gemmatimonadales bacterium] diamond 822 80.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
28329776 28329776 PRJNA1022139_P_NODE_4226_length_621_cov_1.582117_g4122_i0 PRJNA1022139 4226 621 1.582117 9.82494657 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 46.2 0.0433   NR HXV86517.1 2448054 g4122 i0 45.3 0.309178743961353 64 32 30.4 2 550 362 15 76 HXV86517.1 nucleoside hydrolase [Gemmatimonadales bacterium] diamond 192 46.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
28582579 28582579 PRJNA1022139_P_NODE_31647_length_260_cov_2.197861_g31542_i0 PRJNA1022139 31647 260 2.197861 5.7144386 Longimicrobium sp. 2029185 Bacteria Bacteria 44.3 0.0133   NR HEX8696707.1 2029185 g31542 i0 36.1 0.957692307692308 83 46 90 2 8 241 14 94 HEX8696707.1 cyanophycin synthetase [Longimicrobium sp.] diamond 249 44.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
28866562 28866562 PRJNA1022139_P_NODE_18368_length_324_cov_2.454183_g18263_i0 PRJNA1022139 18368 324 2.454183 7.95155292 Longimicrobiales bacterium 2910168 Bacteria Bacteria 124 1.68e-32   NR HKJ01794.1 2910168 g18263 i0 62 2 108 38 98.1 2 324 7 101 207 HKJ01794.1 SDR family NAD(P)-dependent oxidoreductase [Longimicrobiales bacterium] diamond 648 124 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
28929792 28929792 PRJNA1022139_P_NODE_33228_length_254_cov_2.127072_g33123_i0 PRJNA1022139 33228 254 2.127072 5.40276288 Longimicrobiales bacterium 2910168 Bacteria Bacteria 48.9 2.38e-4   NR MDX1493749.1 2910168 g33123 i0 35.7 0.992125984251969 84 48 99.2 1 252 1 72 149 MDX1493749.1 tetratricopeptide repeat protein [Longimicrobiales bacterium] diamond 252 48.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
29466149 29466149 PRJNA1022139_P_NODE_36270_length_249_cov_0.875000_g36165_i0 PRJNA1022139 36270 249 0.875 2.17875 Longimicrobiaceae bacterium 3047548 Bacteria Bacteria 70.9 5.23e-12   NR MET0400428.1 3047548 g36165 i0 40 0.963855421686747 80 48 96.4 0 249 10 49 128 MET0400428.1 LamG-like jellyroll fold domain-containing protein [Longimicrobiaceae bacterium] diamond 240 70.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae   Longimicrobiaceae bacterium
30003504 30003504 PRJNA1022139_P_NODE_39131_length_245_cov_1.831395_g39026_i0 PRJNA1022139 39131 245 1.831395 4.48691775 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 84 3.56e-17   NR HXV17066.1 2026741 g39026 i0 45.5 0.942857142857143 77 42 94.3 0 1 231 1 77 HXV17066.1 D-hexose-6-phosphate mutarotase [Gemmatimonadaceae bacterium] diamond 231 84 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30035070 30035070 PRJNA1022139_P_NODE_5591_length_549_cov_1.342437_g5487_i0 PRJNA1022139 5591 549 1.342437 7.36997913 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 46.6 0.0232   NR MEX2472561.1 2026742 g5487 i0 28.7 0.912568306010929 167 107 86.3 4 503 30 160 323 MEX2472561.1 MlaD family protein [Gemmatimonadota bacterium] diamond 501 46.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30477397 30477397 PRJNA1022139_P_NODE_16353_length_341_cov_1.149254_g16248_i0 PRJNA1022139 16353 341 1.149254 3.91895614 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 44.7 0.0202   NR HTI06866.1 2448054 g16248 i0 33.3 0.818181818181818 93 57 80.9 3 313 38 26 114 HTI06866.1 GGDEF domain-containing protein [Gemmatimonadales bacterium] diamond 279 44.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
30793132 30793132 PRJNA1022139_P_NODE_13334_length_371_cov_1.483221_g13229_i0 PRJNA1022139 13334 371 1.483221 5.50274991 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 45.4 0.0169   NR MCC6930033.1 2026741 g13229 i0 44.4 2.16711590296496 54 30 43.7 0 146 307 361 414 MCC6930033.1 ABC transporter ATP-binding protein [Gemmatimonadaceae bacterium] diamond 804 45.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30817010 30817010 PRJNA1022139_P_NODE_28274_length_273_cov_1.475000_g28169_i0 PRJNA1022139 28274 273 1.475 4.02675 Bacteria 2 Bacteria Bacteria 55.8 1.16e-6   NR HET9011897.1 2026741 g28169 i0 41.8 3.94505494505495 91 49 97.8 3 268 2 205 293 HET9011897.1 bile acid:sodium symporter family protein [Gemmatimonadaceae bacterium] diamond 1077 55.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31140375 31140375 PRJNA1022139_P_NODE_28355_length_273_cov_1.155000_g28250_i0 PRJNA1022139 28355 273 1.155 3.15315 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 104 8.52e-24   NR NNE08319.1 2026742 g28250 i0 52.3 0.967032967032967 88 42 96.7 0 10 273 205 292 NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium] diamond 264 104 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31140400 31140400 PRJNA1022139_P_NODE_40295_length_244_cov_0.900585_g40190_i0 PRJNA1022139 40295 244 0.900585 2.1974274 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 47.4 8.5e-4   NR MBT5060759.1 2026742 g40190 i0 50 0.565573770491803 46 23 56.6 0 215 78 205 250 MBT5060759.1 hypothetical protein [Gemmatimonadota bacterium] diamond 138 47.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31646607 31646607 PRJNA1022139_P_NODE_2537_length_775_cov_1.639601_g2449_i0 PRJNA1022139 2537 775 1.639601 12.70690775 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 52.4 0.00108   NR MCH2475286.1 2026742 g2449 i0 45.6 1.28129032258065 68 34 25.2 1 371 565 307 374 MCH2475286.1 ankyrin repeat domain-containing protein [Gemmatimonadota bacterium] diamond 993 52.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31678281 31678281 PRJNA1022139_P_NODE_22597_length_295_cov_1.734234_g22492_i0 PRJNA1022139 22597 295 1.734234 5.1159903 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 44.7 0.0146   NR NNK64365.1 2026742 g22492 i0 33.3 0.915254237288136 90 55 90.5 2 279 13 391 476 NNK64365.1 hypothetical protein [Gemmatimonadota bacterium] diamond 270 44.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31765408 31765408 PRJNA1022139_P_NODE_41017_length_243_cov_0.905882_g40912_i0 PRJNA1022139 41017 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 114 3.4000000000000004e-27   NR HEY8833273.1 2026741 g40912 i0 67.9 4 81 26 100 0 1 243 431 511 HEY8833273.1 sugar-binding domain-containing protein [Gemmatimonadaceae bacterium] diamond 972 114 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32089662 32089662 PRJNA1022139_P_NODE_11498_length_396_cov_0.931889_g11393_i0 PRJNA1022139 11498 396 0.931889 3.69028044 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 50.4 4.09e-4   NR HXY29682.1 2026741 g11393 i0 28.4 0.772727272727273 102 53 77.3 2 46 351 82 163 HXY29682.1 protein kinase [Gemmatimonadaceae bacterium] diamond 306 50.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32216374 32216374 PRJNA1022139_P_NODE_42878_length_241_cov_0.916667_g42773_i0 PRJNA1022139 42878 241 0.916667 2.20916747 Longimicrobiales bacterium 2910168 Bacteria Bacteria 98.2 1.57e-22   NR MCH1570076.1 2910168 g42773 i0 65.2 0.858921161825726 69 24 85.9 0 210 4 13 81 MCH1570076.1 sulfotransferase domain-containing protein [Longimicrobiales bacterium] diamond 207 98.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
32279773 32279773 PRJNA1022139_P_NODE_40579_length_244_cov_0.900585_g40474_i0 PRJNA1022139 40579 244 0.900585 2.1974274 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 40.8 0.0327   NR NJD18513.1 2026742 g40474 i0 36.4 0.676229508196721 55 31 67.6 1 42 206 5 55 NJD18513.1 type II toxin-antitoxin system VapC family toxin [Gemmatimonadota bacterium] diamond 165 40.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;